Table 1.
The repeat number of 15-loci VNTR for 325 MTB strains
VNTR loci | HGDI score | No. of repeats in H37Rv | Repeat Numbers of VNTR-loci in the Isolates | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
| |||||||||||
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | |||
ETRA | 0.585 | 3 | 1 | 35 | 73 | 193 | 9 | 12 | 2 | ||
ETRB | 0.229 | 3 | 38 | 283 | 4 | ||||||
ETRC | 0.163 | 4 | 9 | 14 | 297 | 2 | 3 | ||||
ETRD | 0.553 | 3 | 9 | 94 | 195 | 21 | 4 | 2 | |||
ETRE | 0.665 | 3 | 2 | 16 | 63 | 152 | 91 | 1 | |||
MIRU10 | 0.679 | 3 | 14 | 102 | 143 | 55 | 7 | 4 | |||
MIRU16 | 0.591 | 2 | 11 | 193 | 61 | 45 | 15 | ||||
MIRU23 | 0.242 | 6 | 1 | 7 | 281 | 34 | 2 | ||||
MIRU26 | 0.726 | 3 | 2 | 4 | 11 | 8 | 21 | 53 | 143 | 72 | 11 |
MIRU27 | 0.471 | 3 | 2 | 30 | 225 | 67 | 1 | ||||
MIRU39 | 0.598 | 2 | 5 | 42 | 172 | 106 | |||||
MIRU40 | 0.577 | 1 | 4 | 49 | 202 | 61 | 9 | ||||
Mtub21 | 0.785 | 2 | 12 | 8 | 32 | 85 | 93 | 75 | 15 | 5 | |
Mtub30 | 0.622 | 2 | 67 | 163 | 95 | ||||||
Mtub39 | 0.477 | 5 | 27 | 19 | 229 | 43 | 7 |