Table 2.
Method | No. of clustered strains | No. of clusters | Cluster size | Clustering rate (%) | HGDI score | ||
---|---|---|---|---|---|---|---|
| |||||||
All strains | Beijing family | Other strains | |||||
Spoligotyping | 310 | 16 | 2-263 | 90.46 | 0.3444 | 0.0375 | 0.9655 |
15-loci VNTR | 105 | 35 | 2-6 | 21.54 | 0.9980 | 0.9892 | 0.9963 |
Spoligotyping and VNTR | 87 | 26 | 2-5 | 18.77 | 0.9991 | 0.9932 | 0.9989 |