2J	Two hybrid junctions
2J-COL	Two hybrid co-linear junctions
2J-NL	Two hybrid non-linear junctions
5FU-CDDP	5-Fluorouracil-Cisplatin
5FU-MMC	5-Fluorouracil-Mitomycin C
AJCC	American Joint Committee on Cancer
ASCC	Anal squamous cell carcinoma
CR	Complete response
CRT	Chemo-radiotherapy
EPI	Episomal
HIV	Human immunodeficiency virus
HNSCC	Head and neck squamous cell carcinoma
HPV	Human papillomavirus
MJ	Multiple hybrid junction
MJ-CL	Multiple hybrid junctions clustered in one locus
MJ-SC	Multiple hybrid junctions scattered at distinct loci
NGS	Next-Generation Sequencing
NS	Not significant
OS	Overall survival
RT	Radiation therapy