TABLE 2.
Data set | % of genes |
||
---|---|---|---|
DE genes (FDR < 0.05) (% of input transcripts) |
Upregulated genes in BF+T group (% of DE transcripts) |
Downregulated genes in BF+T group (% of DE transcripts) |
|
Complete | 36 | 93 | 7 |
Rarefieda | 40 | 88 | 12 |
The rarefied data set was based on 140,000 reads per sample.