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. 2020 Jan 14;5(1):e00451-19. doi: 10.1128/mSystems.00451-19

TABLE 2.

Ratios of DE genes in BF+T and BF-bx groups

Data set % of genes
DE genes
(FDR < 0.05)
(% of input transcripts)
Upregulated genes
in BF+T group
(% of DE transcripts)
Downregulated genes
in BF+T group
(% of DE transcripts)
Complete 36 93 7
Rarefieda 40 88 12
a

The rarefied data set was based on 140,000 reads per sample.