Table 2. IGH sequence statistics.
Sample ID | Clean fragments | Aligned fragments | Alignment rate (%) | Fragments used | Clonotype number | Out of frame | Reads | Resample reads |
---|---|---|---|---|---|---|---|---|
H1 | 7,199,220 | 6,979,148 | 96.94 | 6,157,658 | 26,609 | 9,532 | 6,060,539 | 5,591,443 |
H2 | 7,619,011 | 7,267,210 | 95.38 | 6,456,957 | 17,265 | 4,620 | 6,367,390 | 5,591,443 |
H3 | 9,445,266 | 9,130,907 | 96.67 | 8,303,268 | 27,477 | 9,050 | 8,174,162 | 5,591,443 |
H4 | 8,960,188 | 8,621,604 | 96.22 | 7,612,364 | 25,833 | 8,323 | 7,500,096 | 5,591,443 |
P1 | 6,218,164 | 6,138,462 | 98.72 | 5,689,474 | 28,377 | 9,157 | 5,591,443 | 5,591,443 |
P2 | 7,153,755 | 6,986,351 | 97.66 | 6,359,872 | 27,065 | 9,826 | 6,249,078 | 5,591,443 |
P3 | 7,128,894 | 7,030,004 | 98.61 | 6,508,507 | 25,453 | 8,103 | 6,399,782 | 5,591,443 |
P4 | 7,689,752 | 7,553,632 | 98.23 | 6,899,318 | 26,620 | 8,669 | 6,774,501 | 5,591,443 |
P5 | 9,373,266 | 9,271,638 | 98.92 | 8,514,711 | 55,567 | 23,321 | 8,364,642 | 5,591,443 |
P6 | 9,336,294 | 9,238,211 | 98.95 | 8,465,770 | 46,407 | 14,962 | 8,308,364 | 5,591,443 |
P7 | 10,881,177 | 1,080,0389 | 99.26 | 9,940,707 | 63,290 | 26,451 | 9,772,110 | 5,591,443 |
P8 | 9,359,034 | 9,250,877 | 98.84 | 8,464,035 | 49,427 | 20,366 | 8,335,203 | 5,591,443 |