Table 2.

Significant SNPs associated with wheat stripe rust resistance were evaluated in greenhouse experiments with two Pst races (CRY32 and CRY33 at seedling) and in field experiments (2013 GY, 2013 HZ, 2014 GY, and 2014 MY) for adult plant resistance. “Null” denotes no values of r² could be obtained when using data of disease resistance in seeding stage

Marker name	Chrom	Position (Cm)	CRY32		CRY33		2013GY		2013HZ		2014GY		2014MY		MAF	SNP
			P value	r2	P value	r2	P value	r2	P value	r2	P value	r2	P value	r2
BS00067586_51	1B	60.62									3.28E−07	0.48			0.12	T/C
Excalibur_c18876_334	1B	64.89	3.41E−17	Null			3.20E−17	0.54	8.78E−13	0.48	1.94E−18	0.50			0.48	T/C
RAC875_c5227_1385	1B	66.07			9.95E−06	Null									0.25	A/G
wsnp_CAP11_c631_419930	1B	69.30									4.09E−10	0.48			0.18	T/C
Tdurum_contig29087_628	1B	135.96											1.10E−06	0.49	0.25	A/G
Tdurum_contig29087_757	1B	135.96											1.55E−05	0.47	0.27	A/G
Excalibur_c25640_110	1B	173.62	3.07E−07	Null											0.48	T/C
BS00086365_51	2A	47.22					1.08E−11	0.51							0.25	A/G
RAC875_rep_c69619_78	2A	130.89									1.14E−05	0.47			0.34	A/C
IAAV7287	2A	151.45	5.01E−06	Null											0.07	T/C
Kukri_c55951_97	2B	19.16							2.74E−09	0.45	1.70E−19	0.57			0.40	T/C
BobWhite_c32319_313	2B	134.46					1.72E−05	0.46							0.41	A/G
BS00009637_51	2D	96.88	2.37E−06	Null											0.17	C/G
TA002369-0369	4A	154.30											1.99E−05	0.45	0.21	A/G
BS00079942_51	6A	71.24							3.19E−10	0.50					0.12	A/G
wsnp_Ex_c965_1846161	6A	100.12											2.67E−06	0.48	0.10	T/C