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. 2020 Jan 6;7(1):ofz547. doi: 10.1093/ofid/ofz547

Table 2.

Identification of Enteric Pathogens in Patients With HIV Detected by Gastrointestinal Pathogen Panel or Conventional Stool Testing

Conventional Stool Evaluation (n = 45) Gastrointestinal Pathogen Panel (n = 124)
Bacteria, No.
 CDI 11 29
Escherichia coli species
  EAEC - 34
  EPEC - 40
  ETEC - 5
Campylobacter sp. 2 13
Salmonella sp. 1 1
Yersinia sp. 0 1
Shigella/enteroinvasive E. coli 0* 22*
  Shigella sp. (confirmed) 0* 12*
Aeromonas sp. 1 0
Mycobacterium sp. 1 0
Viral, No. 0 29
 Adenovirus - 2
 Astrovirus - 2
 Norovirus - 22
 Rotavirus - 1
 Sapovirus - 2
Parasites, No.
Cryptosporidium 5 3
Giardia lamblia 9 13
Nonpathogenic parasites, No.
Entamoeba coli 7 0
Entamoeba hartmanni 2 0
Endolimax nana 7 0
Iodamoeba butchilii 2 0
Blastocytis hominis 6 0
Co-infections, No. (%) 6 (13.3)* 60 (48.4)*

Abbreviations: CDI, Clostridium difficile infection; EAEC, enteroaggregative Escherichia coli; EPEC, enteropathogenic E. coli; ETEC, enterotoxigenic E. coli.

*Indicates a significant difference in detection between GPP and conventional stool testing; Shigella/enteroinvasive E. coli P = .001; Shigella sp. (confirmed) P = .037; co-infections P < .001.