Table 2.
Gene | Cycas | Ginkgo | Pinus | Welwitschia | Taxus |
---|---|---|---|---|---|
rrn5 | 1 | 1 | 3 | 1 | 1 |
rrn18 | 1 | 1 | 1 | 1 | 2 |
rrn26 | 1 | 1 | 2 | 1 | 1 |
trnC-GCA | 1 | 1 | 0 | 0 | 0 |
trnD-GUC | 1 | 1 | 1 | 1 | 2 |
trnE-UUC | 1 | 1 | 1c | 1 | 2 |
trnF-GAA | 1 | 2 | 0 | 0 | 0 |
trnG-UCC | 0 | 1c | 0 | 0 | 0 |
trnG-GCC | 1 | 0 | 0 | 0 | 0 |
trnH-GUG | 0 | 0 | 1 | 0 | 0 |
trnH-GUG-cp | 1 | 1 | 0 | 0 | 0 |
trnK-UUU | 1 | 1c | 1 | 0 | 0 |
trnL-CAA | 1a | 0 | 0 | 0 | 0 |
trnL-UAA | 1b | 2 | 0 | 0 | 0 |
trnL-UAG | 1 | 1 | 0 | 0 | 0 |
trnfM-CAU | 4 | 1 | 2 | 0 | 2 |
trnfM-CAU-cp | 0 | 0 | 0 | 1 | 0 |
trnM-CAU-cp | 2 | 1 | 0 | 0 | 0 |
trnN-GUU | 1d | 0 | 0 | 0 | 0 |
trnP-AGG | 1 | 1 | 0 | 0 | 0 |
trnP-UGG | 1c | 1 | 2 | 0 | 0 |
trnQ-UUG | 1c | 1 | 1 | 1 | 0 |
trnR-ACG-cp | 0 | 0 | 0 | 1 | 0 |
trnR-UCU | 1c | 1 | 0 | 0 | 0 |
trnR-UCG | 0 | 0 | 0 | 0 | 1 |
trnS-GCU | 1 | 1 | 0 | 0 | 0 |
trnS-GGA-cp | 1b | 0 | 0 | 0 | 0 |
trnS-UGA | 1 | 1 | 0 | 0 | 0 |
trnW-CCA | 1 | 2 | 1 | 0 | 0 |
trnW-CCA-cp | 0 | 0 | 0 | 1 | 1 |
trnY-GUA | 1 | 1 | 1 | 1 | 1 |
Total rRNA | 3 | 3 | 6 | 3 | 4 |
Total tRNA | 27 | 23 | 12 | 8 | 10 |
apreviously un-annotated tRNA genes; b tRNA gene(s) containing intron(s); c Anticodon is inferred to be edited; d tRNA genes characterized as a “chlamydial” copy