Table 1.
Comparison of Chlorella vulgaris 211/11P genome with other known microalgae genomes
| Chlorella vulgaris 211/11P (this work) | Chromochloris zofingiensis (Roth et al., 2017) | Chlamydomonas reinhardtii (v5.5) (Merchant et al., 2007; Blaby et al., 2014) | Chlorella variabilis NC64A (Blanc et al., 2010) | Nannochloropsis gaditana B‐31 (Corteggiani Carpinelli et al., 2014) | Chlorella sorokiniana 1230 (Hovde et al., 2018) | |
|---|---|---|---|---|---|---|
| Sequenced genome size | 40 Mbp | 57 Mbp | 107 Mbp | 46.2 Mbp | 26.3 Mbp | 58.5 Mbp |
| Genome technologies | PacBio + BioNano + Illumina | PacBio + OpGen + Illumina | Sanger + 454 + BAC + genetic map | Sanger WGS | 454 + SOLiD + BAC | PacBio + Illumina |
| No of scaffold | 14 | 19 | 17 chromosomes | 30 | 21 | 20 |
| % scaffolded genome | 98.9% | 95.4% | 98.2% | 89% | 92.2% | 100% |
| Scaffold N50 | 2.8 Mbp | 3.72 Mbp | 7 Mbp | 1.5 Mbp | 1 Mbp | 3.82 Mbp |
| % G+C | 61% | 51% | 64% | 67% | 54.2% | 63.8% |
| No of genes | 10 724 | 15 274 | 17 741 | 9791 | 10 646 | 12 871 |
| Exon average length (bp) | 194 | 291 | 261 | 170 | 449 | 152 |
| Intron average Length (bp) | 207 | 267 | 269 | 209 | 178 | 215 |
| Ave Exons Per transcript | 8.12 | 5 | 8.5 | 7.3 | 2.71 | 10.9 |