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. 2019 Dec 11;10(1):410–430. doi: 10.1002/ece3.5905

Table 3.

Common causes of mortality as identified via the three modeling frameworks

Variable name LMM estimate COX ph estimate

COX ph

p‐value

Elastic net estimate Horseshoe estimate Horseshoe shrinkage
Sex*** 1.76 (M) 0.015 0.21 (M) 0.12 (M) 0.81
Departure weight 0.32 0.40 0.05 0.85
Departure date 0.09 0.79 0.00 0.87
Departure drift rate 0.16 0.68 0.01 0.87
Max speed
Intercept*** 1.29 (0.12) 1.38 0.003 0.11 0.08 0.85
Slope −0.10 (0.099) 0.43 0.23 0.02 0.88
Distance swam
Intercept*** 51.30 (7.45) 1.28 0.002 0.26 0.10 0.83
Slope −5.98 (5.09) 0.48 0.16 0.05 0.87
Current deviation
Intercept 91.58 (10.75) −0.19 0.64 −0.01 0.90
Slope 5.31 (11.12) −0.29 0.51 −0.03 0.89
Dive depth
Intercept 135.06 (29.93) −0.50 0.16 −0.02 0.86
Slope 20.60 (13.54) −0.62 0.11 −0.03 0.87
Dive duration
Intercept 447.43 (86.26) −0.32 0.39 −0.00 0.87
Slope** 35.21 (34.98) −0.87 0.03 −0.06 −0.04 0.86
Scaled bottom duration
Intercept 0.57 (0.03) −0.17 0.64 −0.00 0.88
Slope −0.02 (0.02) −0.37 0.33 −0.02 0.88
PrCA rate
Intercept 0.05 (0.01) −0.76 0.07 −0.03 −0.05 0.86
Slope** −0.002 (0.007) 0.74 0.11 0.05 0.10 0.83
Scaled surface interval
Intercept 0.15 (0.03) 0.36 0.36 −0.00 0.87
Slope 0.003 (0.005) 0.66 0.13 0.01 0.90
Swim effort
Intercept 14.00 (1.64) 0.13 0.73 0.00 0.87
Slope** 0.01 (0.99) 0.70 0.06 0.07 0.05 0.85
Drift rate change
Intercept −0.005 (0.006) −0.85 0.03 −0.02 0.87
Slope 0.006 (0.005) −0.55 0.18 −0.05 0.86
Max wind
Intercept 14.51 (0.50) −0.13 0.73 0.01 0.89
Slope −0.09 (0.35) −0.39 0.33 −0.01 0.90
Max wave height
Intercept 4.63 (0.19) −0.12 0.80 −0.00 0.91
Slope NA NA NA NA NA  NA
Sea surface temperature
Intercept** 2.99 (0.71) −0.57 0.07 −0.10 −0.06 0.85
Slope −0.29 (0.47) 0.36 0.35 0.05 0.86
Max EKE
Intercept** 0.05 (0.02) −0.48 0.15 −0.08 −0.08 0.85
Slope −0.003 (0.02) 0.11 0.75 0.02 0.88

For each potential predictor of survival: (a) coefficient estimates from linear mixed‐effects models (LMMs; standard deviation around random effects in brackets), (b) Cox ph estimates, (c) p‐values from analysis of variance on Cox ph tests, (d) elastic net parameter estimates, (e) parameter estimates from horseshoe analyses, and (f) proportion of shrinkage applied to each horseshoe parameter estimate. Note that for Cox ph, elastic net and horseshoe estimates, a positive value means a decrease in survival with increasing LMM coefficient. Variables selected by two (**) or thee (***) multiple methods are highlighted in bold with selected values underlined.