Table 4.
Functional annotation summary for species.
Species | NR | Swiss-port | KOG | GO | KEGG | Total | Ratio |
---|---|---|---|---|---|---|---|
S. oconnori | 45,296 | 29,701 | 40,793 | 28,842 | 28,816 | 46,972 | 52.97% |
S. lissolabiatus | 45,091 | 30,793 | 41,064 | 30,203 | 29,922 | 46,516 | 58.83% |
S. nukiangensis | 46,557 | 31,077 | 42,380 | 30,450 | 30,185 | 48,122 | 56.86% |
S. plagiostomus | 49,111 | 33,194 | 44,034 | 34,896 | 32,267 | 51,264 | 61.64% |
S. labiatus | 43,749 | 29,702 | 39,846 | 28,668 | 28,837 | 44,956 | 58.69% |
S. davidi | 47,898 | 32,467 | 42,544 | 35,628 | 31,610 | 50,962 | 60.85% |
P. kaznakovi | 58,392 | 34,174 | 49,960 | 33,669 | 33,253 | 62,216 | 40.18% |
G. namensis | 44,310 | 29,970 | 40,147 | 28,721 | 29,102 | 45,732 | 54.14% |
G. przewalskii | 43,104 | 29,502 | 39,141 | 28,524 | 28,628 | 44,387 | 56.36% |
G. eckloni | 45,847 | 31,699 | 41,648 | 30,754 | 30,813 | 47,353 | 54.27% |
G. selincuoensis | 49,768 | 32,165 | 44,381 | 31,049 | 31,239 | 51,828 | 48.50% |
S. younghusbandi | 46,369 | 33,008 | 42,487 | 31,612 | 32,070 | 47,533 | 58.66% |
S. pylzovi | 44,777 | 31,296 | 41,101 | 30,088 | 30,408 | 46,094 | 57.23% |
P. extremus | 46,694 | 32,136 | 42,756 | 30,766 | 31,231 | 48,074 | 55.95% |
O. stewartii# | 43,212 | 29,426 | 38,495 | 32,099 | 28,597 | 46,009 | 59.70% |
The hit number for NR, Swiss-port, KOG, GO, KEGG were summarized. The ratio means the percentage of annotated unigenes to the total assembly sequences.
#The transcriptome data for Oxygymnocypris stewarti was reported in our previous studies17.