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. 2020 Jan 15;10:3007. doi: 10.3389/fmicb.2019.03007

TABLE 2.

Overall and growth stage-related B. napus core bacterial taxa identified at Saskatoon 2016 experiment.

Taxonomy Core in


Phylum Class Order Family Genus Species t v f m
Acidobacteria Chloracidobacteria RB41 Ellin6075 Unclassified Y Y Y Y
Actinobacteria Actinobacteria Actinomycetales Micrococcaceae Arthrobacter Y Y Y Y
Arthrobacter Y Y
Arthrobacter Y Y
Microbacteriaceae Agromyces Y
Thermoleophilia Gaiellales Gaiellaceae Unclassified Y Y Y
Proteobacteria Alphaproteobacteria Rhodospirillales Rhodospirillaceae Skermanella Y Y Y
Rhizobiales Bradyrhizobiaceae Bradyrhizobium Y Y Y Y
Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter rhizosphaerae Y
Xanthomonadales Xanthomonadaceae Stenotrophomonas retroflexus Y Y Y

“Y” represents “yes” for the four rightmost columns under “Core in.” t, overall or total; v, vegetative; f, flowering; and m, maturity growth stages. Repeated genus name indicates the presence of amplicon sequence variant. Please see Supplementary Table S5 for full table showing their corresponding prevalence and relative abundance.