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. 2020 Jan 21;86(3):e02334-19. doi: 10.1128/AEM.02334-19

TABLE 3.

Reaction setup and thermocycler settings used for experimental PCR

Parameter Value of the parameter for:
Rxn_1a Rxn_2 Rxn_3 Rxn_4
Total vol (μl) 50 50 50 25
Primers TR3-TR4 341f-785r 341f-785r Barcodes
Master mix (μl) 20 20 20 10
10 μM primer (μl) 2 2 2 0.94
Template DNA (μl) 2 2 2 1.25
Salinibacter ruber DNA (μl) 0.59
Nuclease-free H2O (μl) 26 26 25.41 12.81
Initial denaturation
    Temp (°C) 95 94 94 94
    Duration (min) 2 3 3 1.5
Denaturation
    Temp (°C) 95 94 94 94
    Duration (min) 1 0.75 0.75 0.5
Annealing
    Temp (°C) 55 60 60 60
    Duration (min) 1.5 1 1 0.5
Elongation
    Temp (°C) 72 72 72 72
    Duration (min) 1.5 1.5 1.5 1.5
Total no. of cycles 35 35 35 10
Final elongation
    Temp (°C) 72 72 72 72
    Duration (min) 10 10 10 5
a

Rxn, reaction.