Table 1.
Variable | Symbol | Unit | Value | Notes and references |
---|---|---|---|---|
Net rate of photosynthesis | A | µmol m−2 s−1 | – | Calculated |
Net hydration of CO 2 to bicarbonate | B | µmol m−3 s−1 | – | Calculated |
Concentration of CO 2 at CO 2 fixation site | C c | µmol m−3 | – | Calculated |
Concentration of bicarbonate at the CO 2 fixation site | C HCO3 − | µmol m−3 | – | Calculated |
Diffusivity of CO 2 (25 °C) | D l | m2 s−1 | Lide, 1999 | |
Diffusivity of CO 2 in cell wall | C CW | m2 s−1 | 3.78×10–10 | Assuming effective porosity of 0.20 (Evans et al., 2009) |
Diffusivity of H CO3 – | D HCO3 − | m2 s−1 | 1.17×10–9 | Geers and Gros (2000) |
Average thickness of tissue | d | µm | – | Calculated from the topologies |
Ratio of final and initial resting lengths of walls | F | – | 1 (spongy mesophyll) 1–10 (palisade mesophyll) |
See the Materials and methods |
Henry’s constant for CO 2 (25 °C) | H | – | 0.83 | Lide (1999) |
Maximum rate of electron transport | J max | μmol m−2 s−1 | 233.23 | ‘Doloress’ tomato (Berghuijs et al., 2015) |
Spring constant of cells aligned along maximum growth direction | k min | MN m−1 | Calculated | See the Materials and methods |
Turnover rate of carbonic anhydrase | k a | s−1 | 3×105 | Pocker and Miksch (1978) |
Michaelis–Menten constant for carbonic anhydrase hydration | K CO2 | mol m−3 | 2.8 | Hatch and Burnell (1990) |
Equilibrium constant of carbonic anhydrase | K eq | mol m−3 | 5.6×10–7 | Pocker and Miksch (1978) |
Michaelis–Menten constant of Rubisco for CO 2 | K m,c | mbar | 267a | Berghuijs et al. (2015) |
Michaelis–Menten constant for carbonic anhydrase hydration | K HCO3 − | mol m−3 | 34 | Pocker and Miksch (1978) |
Michaelis–Menten constant of Rubisco for O 2 | K m,0 | mbar | 164a | Berghuijs et al. (2015) |
Conversion efficiency of light to electron transport | K 2LL | – | 0.357 | Berghuijs et al. (2015) |
Length of mesophyll surface exposed to air per leaf width | L m | – | – | Calculated |
Length to width ratio of palisade mesophyll cells | L:W | – | – | Variable |
Initial resting length of cell wall | l n,0 | µm | Computed | Abera et al. (2013) |
Maximum resting length of cell wall | l n,max | µm | Computed | Abera et al. (2013) |
Oxygen concentration in stroma | O 2 | mbar | 210 | Assumed |
CO 2 permeability of chloroplast envelope | P CO2 | m s−1 | 3.5×10–3 | Gutknecht (1977), or variable |
Mitochondrial respiration | R d | µmol m−2 s−1 | 2.65 | Berghuijs et al. (2015) |
Relative CO 2 /O 2 specificity for Rubisco | S C/O | mbar µbar−1 | 3.260 | Berghuijs et al. (2015) |
Thickness of cell wall | t cw | µm | 0.128 | Berghuijs et al. (2015) |
Thickness of cytosol | t cy | µm | 0.212 | Berghuijs et al. (2015) |
Thickness of membrane | T mem | µm | 0.02 | Tholen and Zhu (2011) |
Rate of triose phosphate utilization | T p | µmol m−2 s−1 | 13.6 | Berghuijs et al. (2015) |
Carboxylation capacity of Rubisco | V c,max | µmol m−2 s−1 | 274 | Berghuijs et al. (2015) |
Concentration of carbonic anhydrase | X a | mol m−3 | 0.27 | Tholen and Zhu (2011) |
Angle expressing directionality of cell wall growth | α | – | Computed | Abera et al. (2013) |
Anisotropy factor | β | – | 0 (spongy mesophyll) | See the Materials and methods |
0–1 (palisade mesophyll) | ||||
Polarity of cell growth | λ | – | 0≤λ≤1 | See the Materials and methods |
Convexity factor | θ | – | 0.797 | Berghuijs et al. (2015) |
Time constant for length to reach maximum | τ | s | 200 000 | Assumed |
CO 2 compensation point | Γ* a | µbar | 0.5O2/SC/O | Berghuijs et al. (2015) |
a These parameters were converted into µmol m−3 liquid by multiplying by PH/RT, where P=101 325 Pa, H=0.83, R=8.314 m3 Pa K−1 mol−1, and T=298 °K.