Figure 2. Genome-wide repeat subfamily changes during viral infection.

(A, B) Number of ERV, long interspersed nuclear element (LINE), short interspersed nuclear element (SINE), DNA, tRNAs, and other repeat subfamilies that are differentially up- and down-regulated during virus infection in human (A) and mouse (B) from TEtranscripts. Viruses are categorized by type of genetic material, and host cell types and Gene Expression Omnibus (GEO) study IDs are indicated. Total numbers of DE genes and DE repeat subfamilies are included in the far right columns, and values are scaled from high (red) to low (white) for each virus genetic material category.