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. 2020 Jan 17;10:1304. doi: 10.3389/fgene.2019.01304

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Copyright © 2020 Qanbari

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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A schematic illustration of historical Ne in chicken. The ancestral demography is inferred in sequence resolution for RJF and white (WL) and brown (BL) layers employing the Pairwise Sequentially Markovian Coalescent [PSMC, Li and Durbin (2011)] framework. The scale on the x-axis is years in the past and the scale on the y-axis represents the historical effective population numbers. Orange (RJF), brown (BL), and cyan (WL) lines represent inferred demography for different populations with bootstraps in lighter colors. Note that inferences of bootstraps are depicted only for one sample of each population.