Table 5.

Statistics on transposable elements (TEs) in Chinese mitten crab genome.

Type	Repbase TEs		TE proteins		De novo		Combined TEs
	Length (bp)	% in genome	Length (bp)	% in genome	Length (bp)	% in genome	Length (bp)	% in genome
DNA	92,713,892	7.29	3,569,566	0.28	58,584,466	4.61	149,193,019	11.74
LINE	12,182,661	0.96	97,531,450	7.67	164,787,780	12.97	201,524,402	15.86
SINE	70,066	0.0055	–	–	4,609,943	0.36	4,618,193	0.36
LTR	18,466,448	1.45	10,647,352	0.84	27,904,457	2.20	49,744,359	3.91
Other	78,097,956	6.14	3,723	0.00029	198,684,468	15.63	216,761,658	17.05
Unknown	96,240	0.0076	–	–	174,272,660	13.71	174,365,180	13.72
Total	167,854,132	13.21	111,728,104	8.79	620,811,245	48.85	691,775,509	54.43