Table 1.
Code[a] | N[b] | RNA sequence[c] |
---|---|---|
G0-P0 | 0 | 3´-UU GUU AAG CAU CCA GUU UUA U-5´ (passenger) 5´-CAA UUC GUA GGU CAA AAU AUU-3´ (guide) |
P0 | 0 | 3´-UUG UUA AGC AUC CAG UUU UAU-5´ |
P1 | 1 | 3´-UUG UUA AGC AUC CAG UUU UAamU-5´ |
P2 | 2 | 3´-UUG UUA AGC AUC CAG UUU UamAamU-5´ |
G0 | 0 | 5´-CAA UUC GUA GGU CAA AAU AUU-3´ |
G3 | 3 | 5´-pCAA UUC GUA GGU CAA AAUamAamUamU-3´ |
G4 | 4 | 5´-pCAA UUC GUA GGU CAA AAamUamAamUamU-3´ |
G5 | 5 | 5´-pCAA UUC GUA GGU CAA AamAamUamAamUamU-3´ |
G6 | 6 | 5´-pCAAUUCGUAGGU CAAamAamAamUamAamUamU-3´ |
G7 | 7 | 5´-pCAAUUCGUAGGU CAamAamAamAamUamAamUamU-3´ |
NTC | 0 | 3´-UU AUC GCU GAU UUG UGU AGU U-5´ (passenger) 5´-UAG CGA CUA AAC ACA UCA A UU-3´ (guide) |
P and G denote the passenger and guide strands, respectively; NTC denotes non-target control siRNA.
N is number of amide modifications.
In RNA sequences, p denotes a phosphate monoester at the 5´-end and each am denotes an internucleoside amide linkage. U or A denotes either a phosphate-to-amide (4) or amide-to-phosphate (1a or 1b) switch monomer being used during solid phase synthesis.