MD	Molecular dynamics
PDB	Protein Data Bank
DOPE	discrete optimized protein energy
Tca. roseopersicina	Thiocapsa roseopersicina
Rba. capsulatus	Rhodobacter capsulatus
Rba. sphaeroides	Rhodobacter sphaeroides
Rps. Palustris	Rhodopseudomonas palustris
Rvi. gelatinosus	Rubrivivax gelatinosus
Rsp. Rubrum	Rhodospirillum rubrum
A. aeolicus	Aquifex aeolicus
E. coli	Escherichia coli
H. marinus	Hydrogenovibrio marinus
R. eutropha	Ralstonia eutropha
S. enterica	Salmonella enterica