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. 2019 Dec 18;21(1):18. doi: 10.3390/ijms21010018
TCGA The Cancer Genome Atlas
ICGC International Cancer Genome Consortium
ML Machine learning
SAMGSR Gene-set analysis-based reduction algorithm
RRFE Reweighted Recursive Feature Elimination
GELnet Generalized Elastic Net
ESTs Expressed Sequence Tags
ICA Independent Component Analysis
PCA Principal Component Analysis
NMF Non-negative Matrix Factorization
HTS High-Throughput Sequencing
SVM Support Vector Machine
RF Random Forest
ANFIS Adaptive Neuro-Fuzzy Inference Systems
RIPPER Repeated Incremental Pruning to Produce Error Reduction
PART Partial Decision Trees
CAMUR Classifier with Alternative and MUltiple Rule-based models
FURIA Fuzzy Unordered Rule Induction Algorithm
MLRules Maximum Likelihood Rule Ensembles
LERS Learning from Examples based on Rough Sets
TSP Top Scoring Pairs
k-TSP k- Top Scoring Pairs
BIOHEL Bioinformatics-oriented Hierarchical Evolutionary Learning
CN2-SD Clark & Niblet–Subgroup Discovery
SDEFSR Subgroup Discovery with Evolutionary Fuzzy Systems
VarSelRF Variable Selection using Random Forests
SVM-RFE Support Vector Machines–Recursive Feature Elimination
FPRF fuzzy pattern–random forest
CART Classification And Regression Tree
LASSO Least Absolute Shrinkage and Selection Operator
Ridge Tikhonov regularization