NGS	Next Generation Sequencing
RNA-seq	RNA Sequencing
RIN	RNA Integrity Number
rRNA	ribosomal RNA
mRNA	micro RNA
siRNA	small interfering RNA
piRNA	piwi-interacting RNA
cDNA	complementary DNA
dUTPs	deoxy-UTPs
UDG	Uracil-N-Glycosylase
SBS	Sequencing by synthesis
BAM	Binary of SAM
IGV	Integrative Genomic Viewer
RPKM	Reads per kilobase of transcript per million mapped reads
FPKM	Fragments per kilobase of transcript per million mapped reads
TPM	Transcripts per million
TMM	Trimmed mean of M-values
DEG	Differentially Expressed Gene
ChIP-seq	Chromatin Immunoprecipitation and Sequencing
UV	Ultraviolet
ChIP qPCR	ChIP quantitative realtime PCR
ENCODE	Encyclopedia of DNA Elements
BWA	Burrow Wheelers alignment
GFP	Green fluorescence protein
YFP	Yellow fluorescence protein
SET	Single-ends tags
PET	Paired-ends tags
JA	Jasmonic acid
CRISPR	Clustered regularly interspaced short palindromic repeats