Table 2.
RT-qPCR analysis of root growth and development of red rice genes during drought stress. Shown are the RT-qPCR results of the plants of red rice grown in the presence and absence of G. diazotrophicus strains Pal5, under water restriction. Mean values and standard errors were calculated from the results of the three replicates. Averages followed by identical capital letters do not differ in the inoculation condition for each soil water treatment, and averages followed by identical lowercase letters do not differ in the percentage of soil water. NI = Uninoculated and I = Inoculated.
| Gene name | Gene ID | 100% | 70% | 50% | 30% | ||||
|---|---|---|---|---|---|---|---|---|---|
| NI | I | NI | I | NI | I | NI | I | ||
| OsGNA1 | Os09g0488000 | 1.0 ± 0.00 | 6.5 ± 0.11 | 5.5 ± 0.82 | 15.0 ± 0.55 | 9.3 ± 0.88 | 20.3 ± 0.74 | 7.2 ± 0.34 | 11.0 ± 0.11 |
| OsMOGS | Os01g0921200 | 1.0 ± 0.00 | 9.3 ± 0.52 | 3.0 ± 0.36 | 17.3 ± 0.90 | 11.2 ± 0.12 | 29.9 ± 1.11 | 9.1 ± 0.88 | 10.2 ± 0.65 |
| OsDGL1 | Os07g0209000 | 1.0 ± 0.00 | 10.5 ± 1.11 | 7.0 ± 0.51 | 18.1 ± 0.60 | 13.0 ± 0.82 | 30.2 ± 0.23 | 4.0 ± 0.65 | 7.5 ± 0.44 |
| OsCYT-INV1 | Os02g0550600 | 1.0 ± 0.00 | 2.0 ± 0.43 | 2.5 ± 0.66 | 8.6 ± 0.33 | 4.8 ± 0.55 | 15.0 ± 0.66 | 1.0 ± 0.22 | 1.0 ± 0.92 |
| OsGLR3.1 | Os02g0117500 | 1.0 ± 0.00 | 17.0 ± 0.72 | 11.0 ± 0.39 | 22.4 ± 1.10 | 15.0 ± 0.13 | 40.7 ± 0.21 | 5.5 ± 0.92 | 2.1 ± 0.36 |
| OsGatB | Os11g0544800 | 1.0 ± 0.00 | 8.0 ± 0.33 | 3.0 ± 0.11 | 14.0 ± 0.03 | 4.7 ± 0.54 | 28.0 ± 0.91 | 3.6 ± 0.43 | 2.9 ± 0.73 |
| OsASL1 | Os03g0305500 | 1.0 ± 0.00 | 22.5 ± 0.82 | 8.0 ± 0.81 | 30.9 ± 0.20 | 11.0 ± 0.62 | 50.0 ± 0.17 | 7.2 ± 0.16 | 3.0 ± 0.54 |
| OsEL5 | Os02g0559800 | 1.0 ± 0.00 | 17.0 ± 0.21 | 7.5 ± 0.21 | 28.0 ± 0.66 | 20.0 ± 0.11 | 45.0 ± 0.39 | 5.9 ± 0.22 | 2.3 ± 0.11 |
| OsSPR1 | Os01g0898300 | 1.0 ± 0.00 | 3.47 ± 0.88 | 6.5 ± 0.22 | 14.0 ± 0.59 | 9.9 ± 0.87 | 18.3 ± 0.73 | 4.2 ± 0.38 | 13.0 ± 0.21 |
| OsMYB1 | Os01g0128000 | 1.0 ± 0.00 | 3.33 ± 0.74 | 3.55 ± 0.76 | 20.3 ± 0.88 | 8.27 ± 0.18 | 39.9 ± 0.11 | 10.1 ± 0.31 | 20.2 ± 0.11 |
| OsARF12 | Os04g0671900 | 1.0 ± 0.00 | 11.5 ± 1.71 | 4.0 ± 0.59 | 15.1 ± 0.67 | 6.07 ± 0.77 | 20.2 ± 0.44 | 5.05 ± 0.45 | 6.5 ± 0.77 |
| OsERF2 | Os06g0181700 | 1.0 ± 0.00 | 4.07 ± 0.43 | 2.8 ± 0.86 | 9.6 ± 0.99 | 5.8 ± 0.74 | 17.0 ± 0.77 | 8.08 ± 0.78 | 9.08 ± 0.82 |
| OsAIM1 | Os02g0274100 | 1.0 ± 0.00 | 11.0 ± 0.45 | 8.77 ± 0.87 | 29.4 ± 0.10 | 11.00 ± 0.23 | 30.9 ± 0.91 | 8.5 ± 0.82 | 8.1 ± 0.88 |
| SHB | Os05g0389000 | 1.0 ± 0.00 | 10.0 ± 0.11 | 2.0 ± 0.41 | 18.0 ± 0.47 | 4.1 ± 0.11 | 22.0 ± 0.41 | 4.6 ± 0.43 | 4.9 ± 0.44 |
| ARL1/CRL1 | Os03g0149100 | 1.0 ± 0.00 | 4.54 ± 0.44 | 3.03 ± 0.43 | 10.9 ± 0.44 | 6.04 ± 0.46 | 34.0 ± 0.87 | 7.8 ± 0.17 | 8.0 ± 0.57 |
| OsIAA23 | Os06g0597000 | 1.0 ± 0.00 | 5.0 ± 0.87 | 2.57 ± 0.21 | 2.00 ± 0.66 | 1.89 ± 0.11 | 1.55 ± 0.39 | 1.21 ± 0.22 | 1.11 ± 0.11 |
| OsNAL1 | Os04g0615000 | 1.0 ± 0.00 | 5.5 ± 0.81 | 2.5 ± 0.88 | 10.0 ± 0.44 | 7.3 ± 0.71 | 15.3 ± 0.49 | 7.2 ± 0.55 | 10.0 ± 0.01 |
| OsCHR4/CRL6 | Os07g0497100 | 1.0 ± 0.00 | 20.2 ± 0.72 | 7.0 ± 0.88 | 28.3 ± 0.97 | 10.2 ± 0.72 | 39.9 ± 0.11 | 9.11 ± 0.18 | 10.4 ± 0.45 |
| OsCKX4 | Os01g0940000 | 1.0 ± 0.00 | 15.5 ± 0.11 | 4.04 ± 0.41 | 28.1 ± 0.20 | 6.06 ± 0.42 | 30.4 ± 0.24 | 4.6 ± 0.75 | 5.5 ± 0.54 |
| OsIAA11 | Os03g0633500 | 1.0 ± 0.00 | 8.0 ± 0.93 | 7.5 ± 0.86 | 6.6 ± 0.23 | 6.8 ± 0.75 | 6.00 ± 0.96 | 1.0 ± 0.22 | 1.2 ± 0.92 |
| OsSLL1 | Os04g0379900 | 1.0 ± 0.00 | 11.0 ± 0.72 | 4.09 ± 0.78 | 20.4 ± 0.10 | 5.0 ± 0.43 | 40.9 ± 0.91 | 4.5 ± 0.12 | 5.1 ± 0.56 |
| OsORC3 | Os10g0402200 | 1.0 ± 0.00 | 9.0 ± 0.33 | 4.8 ± 0.11 | 18.0 ± 0.07 | 6.7 ± 0.54 | 23.0 ± 0.74 | 4.6 ± 0.87 | 5.9 ± 0.79 |
| OsHOX1 | Os10g0561800 | 1.0 ± 0.00 | 3.33 ± 0.22 | 1.5 ± 0.81 | 9.99 ± 0.29 | 5.05 ± 0.25 | 24.0 ± 0.44 | 4.2 ± 0.15 | 5.0 ± 0.55 |