Table 1.
Strain | Location | Species | # of Contigs | Size (bp) | %GC | Genes | CDSs | ST* |
---|---|---|---|---|---|---|---|---|
B72 | BAF FE | E. casseliflavus | 32 | 3,538,396 | 42.8 | 3344 | 3283 | NA |
B79 | BAF FE | E. casseliflavus | 49 | 3,527,325 | 42.9 | 3327 | 3268 | NA |
W41 | CAS PE | E. faecalis | 21 | 2,693,209 | 37.7 | 2528 | 2471 | 116 |
B139 | BAF FE | E. faecalis | 30 | 2,720,730 | 37.7 | 2553 | 2496 | 138/501 |
W314 | CAS PE | E. faecalis | 11 | 2,721,427 | 37.6 | 2583 | 2524 | 277 |
C34 | CAS PE | E. faecalis | 13 | 2,731,087 | 37.6 | 2615 | 2556 | 715 |
R95 | BAF PE | E. faecalis | 38 | 2,761,310 | 37.6 | 2596 | 2538 | 674 |
W350 | CAS FE | E. faecalis | 28 | 2,789,796 | 37.6 | 2731 | 2673 | 84 |
R76 | BAF FE | E. faecalis | 51 | 2,800,339 | 37.6 | 2690 | 2627 | 16 |
C106 | CAS PE | E. faecalis | 24 | 2,817,683 | 37.4 | 2670 | 2610 | 16 |
B48 | BAF PE | E. faecalis | 29 | 2,822,491 | 37.5 | 2701 | 2641 | 16 |
B168 | BAF PE | E. faecalis | 39 | 2,834,215 | 37.5 | 2725 | 2667 | 21 |
W191 | CAS FE | E. faecalis | 22 | 2,839,739 | 37.6 | 2745 | 2684 | 207 |
W460 | CAS FE | E. faecalis | 27 | 2,848,194 | 37.4 | 2733 | 2674 | 672 |
H120S2 | BAF PE | E. faecalis | 21 | 2,853,021 | 37.4 | 2731 | 2670 | 16 |
C33 | CAS PE | E. faecalis | 19 | 2,860,595 | 37.3 | 2722 | 2662 | 16 |
R378 | BAF FE | E. faecalis | 50 | 2,892,126 | 37.5 | 2858 | 2796 | 326 |
W75 | CAS FE | E. faecalis | 59 | 2,901,424 | 37.5 | 2838 | 2776 | 209 |
B6 | BAF FE | E. faecalis | 48 | 2,906,126 | 37.5 | 2796 | 2738 | 26 |
R395 | BAF PE | E. faecalis | 35 | 2,951,239 | 37.5 | 2844 | 2785 | 40 |
W195 | CAS FE | E. faecalis | 30 | 2,970,793 | 37.5 | 2865 | 2806 | 40 |
H114S2 | BAF PE | E. faecalis | 35 | 2,979,979 | 37.4 | 2881 | 2822 | 40 |
C379 | CAS FE | E. faecalis | 42 | 2,988,783 | 37.5 | 2902 | 2844 | 40 |
R61 | BAF FE | E. faecalis | 37 | 3,004,659 | 37.3 | 2969 | 2907 | 16 |
B150 | BAF FE | E. faecalis | 41 | 3,012,117 | 37.3 | 2955 | 2893 | 16 |
W37 | CAS PE | E. faecalis | 68 | 3,088,982 | 37.3 | 3051 | 2990 | 768 |
C329 | CAS FE | E. faecium | 63 | 2,480,628 | 38.1 | 2374 | 2305 | 40 |
B466 | BAF FE | E. faecium | 71 | 2,553,406 | 38.1 | 2512 | 2443 | 672 |
C567 | CAS FE | E. faecium | 21 | 2,778,016 | 37.9 | 2714 | 2644 | 1216 |
C12d | CAS PE | E. faecium | 169 | 2,879,332 | 37.7 | 2823 | 2755 | 18 |
H101S2 | BAF PE | E. faecium | 177 | 2,884,826 | 37.8 | 2836 | 2770 | 18 |
H123S2 | BAF PE | E. faecium | 170 | 2,912,775 | 37.7 | 2871 | 2803 | 18 |
H53S1 | CAS PE | E. faecium | 165 | 2,959,005 | 37.6 | 2915 | 2847 | 18 |
F11j | CAS PE | E. faecium | 181 | 2,964,368 | 37.6 | 2916 | 2848 | 18 |
R407 | BAF PE | E. faecium | 176 | 3,005,175 | 37.5 | 2955 | 2887 | 18 |
B492 | BAF FE | E. faecium | 189 | 3,008,305 | 37.5 | 2961 | 2893 | 18 |
R337 | BAF PE | E. faecium | 195 | 3,023,784 | 37.5 | 2992 | 2924 | 18 |
W17 | CAS FE | E. gallinarum | 14 | 3,367,806 | 40.5 | 3161 | 3102 | NA |
G12 s | CAS PE | E. gallinarum | 30 | 3,442,529 | 40.4 | 3303 | 3244 | NA |
BAF: biological aerated filter, CAS: conventional activated sludge, PE: primary effluent, FE: final effluent, % GC: guanine-cytosine content, CDS: protein coding sequence, ST: sequence type, NA: not available