Table 1.
Data collection and refinement | PD-1H (Protein Data Bank ID 6U6V) |
Data collection | |
Space group | P21 |
Cell dimensions | |
a, b, c (Å) | 28.82, 55.83, 42.27 |
α, β, γ (°) | 90, 97.69, 90 |
Resolution (Å) | 41.9–1.9 (1.95–1.90) |
Rsym or Rmerge | 0.097 (0.697) |
Mean I/σI | 10.4 (1.3) |
CC1/2 | (0.530) |
Completeness (%) | 95.2 (75.5) |
Redundancy | 3.4 (2.8) |
Refinement | |
Resolution (Å) | 41.9–1.9 |
No. reflections | 9,503 |
Rwork/Rfree | 0.209/0.245 (0.323/0.373) |
No. atoms | |
Protein | 1,163 |
Ligand | 14 |
Water | 35 |
Average B-factors (Å2) | |
Protein | 42.9 |
Ligand | 48.6 |
Water | 41.8 |
rmsd | |
Bond lengths (Å) | 0.016 |
Bond angles (°) | 2.1 |
Ramachandran favored (%) | 95.1 |
Ramachandran allowed (%) | 4.9 |
Ramachandran outliers (%) | 0 |
Statistics in parentheses indicate those for the highest resolution shell.