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. 2020 Jan 28;21:80. doi: 10.1186/s12864-020-6486-3

Table 2.

Number of samples predicted to contain the specified number of strains, using different methods and databases, for the set of 105 samples from Bryant et al.

Number of predicted Strains QuantTB
(d10*)
StrainSeeker
(d10*)
Sigma
(d10*)
QuantTB
(d10)
QuantTB
(d25)
QuantTB
(d50)
QuantTB
(d100)
1 96 1 1 94 96 95 94
2 9 0 0 11 9 10 11
5 to25 0 6 21 0 0 0 0
26 to 45 0 90 65 0 0 0 0
46 to 60 0 2 8 0 0 0 0