. 2020 Jan 28;15(1):e0227991. doi: 10.1371/journal.pone.0227991

Table 2. List of genes identified in the plastomes of Aspidogyne longicornu, Cyclopogon argyrifolius, Eurystyles cotyledon, Lankesterella ceracifolia, Prescottia stachyoides and Sauroglossum elatum.

Group of gene	Gene name
Gene expression machinery
Ribosomal RNA genes	rrn4.5^b; rrn5^b; rrn16^b; rrn23^b
Transfer RNA genes	trnA–UGC^a ^b; trnC–GCA; trnD–GUC; trnE–UUC; trnF–GAA; trnfM–CAU; trnG–GCC^b; trnG–UCC; trnH–GUG^b; trnI–CAU^b; trnI–GAU^a ^b; trnK–UUU; trnL–CAA^b; trnL–UAA^a; trnL–UAG; trnM–CAU; trnN–GUU^b; trnP–UGG; trnQ–UUG; trnR–ACG^b; trnR–UCU; trnS–GCU; trnS–GGA; trnS–UGA; trnT–GGU; trnT–UGU; trnV–GAC^b; trnV–UAC^a; trnW–CCA; trnY–GUA
Small subunit of ribosome	rps2; rps3; rps4; rps7^b; rps8; rps11; rps12^a ^b; rps14; rps15; rps16^a; rps18; rps19^b
Large subunit of ribosome	rpl2^a ^b; rpl14; rpl16^a; rpl20; rpl22 ^b; rpl23^b; rpl32; rpl33; rpl36
DNA-dependent RNA polymerase	rpoA; rpo^b; rpoC1^a; rpoC2
Translational initiation factor	infA
Maturase	matK
Genes for photosynthesis
Subunits of photosystem I (PSI)	psaA; psaB; psaC; psaI; psaJ; ycf3^a; ycf4
Subunits of photosystem II (PSII)	psbA; psbB; psbC; psbD; psbE; psbF; psbH; psbI; psbJ; psbK; psbL; psbM; psbN; psbT; psbZ
Subunits of cytochrome b₆f	petA; petB^a; petD^a; petG; petL; petN
Subunits of ATP synthase	atpA; atpB; atpE; atpF^a; atpH; atpI
Subunits of NADH dehydrogenase	ndhA^a ^c ^d; ndhB^a ^b ^c; ndhC^c ^d; ndhD^c ^d; ndhE^d; ndhF^c ^d; ndhG^c ^d; ndhH^c ^d; ndhI^c ^d; ndhJ^c ^d; ndhK^c ^d
Large subunit of Rubisco	rbcL
Other functions
Envelope membrane protein	cemA
Subunit of acetyl-CoA carboxylase	accD
C-type cytochrome synthesis	ccsA
Subunit of protease Clp	clpP^a
Component of TIC complex	ycf1^b
Unknown function	ycf2^b

^a Genes containing introns

^b Duplicated genes

^c Deleted in Eurystyles

^d Deleted in Lankesterella