TABLE 1.
X-ray data collection and refinement statistics.
Data collection | PaHigA–DNA(28 bp) | PaHigA–DNA(18 bp) |
Beamline | SSRF 18U1 | SSRF 18U1 |
Wavelength (Å) | 0.9788 | 0.9788 |
Space group | P212121 | P21 |
Unit-cell parameters | a = 77.8 Å, b = 90.7 Å, c = 91.7 Å, α = β = γ = 90° | a = 57.3 Å, b = 95.6 Å, c = 128.9 Å, α = γ = 90°, β = 96.3 |
Resolution (Å) | 3.14 (3.23–3.14)a | 2.50 (2.54–2.50)a |
Number of unique reflections | 11506 (807) | 47471 (2352) |
Completeness (%) | 98.3 (94.3) | 99.3 (99.2) |
Redundancy | 6.6 (3.8) | 6.2 (5.6) |
Mean I/o’ (I) | 11.20 (1.77) | 20.08 (1.64) |
Molecules in asymmetric unit | 4 | 8 |
Rmerge (%) | 10.9 (68.5) | 10.5 (86.5) |
Rmeas (%) | 11.0 (75.4) | 11.4 (93.5) |
CC1/2 | 99.9 (97.8) | 100.3 (89.3) |
Structure refinement | ||
Reflections used in refinement | 11436 | 47323 |
Resolution range (Å) | 45.35–3.14 | 47.20–2.50 |
Rwork/Rfree (%) | 21.5/28.0 | 21.8/26.2 |
Protein atoms | 2925 | 5830 |
Protein residues | 369 | 733 |
Waters | 0 | 62 |
Average B factor (Å2) | ||
Protein | 75.56 | 65.27 |
DNA | 79.85 | 55.62 |
Ramachandran plot (%) | ||
Most favored | 94.2 | 94.7 |
Allowed | 4.7 | 3.8 |
Disallowed | 1.1 | 1.3 |
R.m.s. deviations | ||
Bond lengths (Å) | 0.013 | 0.010 |
Bond angles (°) | 1.494 | 1.179 |
aThe values in parenthesis means those for the highest resolution shell.