Table 1.
Statistics and resources
| Assembly | |
| Number of contigs | 1364 |
| Total genome length (bp) | 1,003,738,563 |
| Longest contig (bp) | 19,396,355 |
| Smallest contig (bp) | 21,178 |
| N50 contig length (bp) | 2,817,412 |
| Annotation | |
| Number of genes | 38,773 |
| Genomic repeat content (%) | 47 |
| G + C (%) | 41.60 |
| LTR retrotransposons (%) | 4.9–11.2 |
| Eukaryote BUSCOs (n = 303) | Complete 86.1%, single-copy 82.8%, duplicated 3.3%, fragmented 4.6%, missing 9.3% |
| Actinopterygian BUSCOs (n = 4584) | Complete 85.4%, single-copy 82.0%, duplicated 3.4%, fragmented 8.2%, missing 6.4% |
| Accession |
NCBI BioProject PRJNA549924 Accession VHKM00000000 [60] |
| Sequence data available in SRA | |
| RNA (Wellband & Heath 2017) |
Liver transcriptome NCBI BioProject PRJNA321539 [61] |
| RNA (Adrian-Kalchhauser 2018) |
Embryonic transcriptome (1–32 cell stages) from 16 clutches NCBI BioProject PRJNA547711 [62] |
| DNAme (Somerville 2019) |
Brain DNA methylation data from 15 males NCBI BioProject PRJNA515617 [63] |
| RADseq (this study) |
RAD Seq data from 120 individuals NCBI BioProject PRJNA547536 [63] |
| ATACseq (ongoing unpublished study headed by IAK) |
ATAC Seq data of liver and brain from 50 individuals NCBI BioProject PRJNA551348 [64] |
Key figures of the round goby genome assembly including annotation statistics and available short-read resources