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. 2019 Nov 26;10:2755. doi: 10.3389/fmicb.2019.02755

TABLE 1.

Data collection and refinement statistics.

Parameters High resolution Se-peak
Synchrotron 11C Micro-MX, PAL 11C Micro-MX, PAL
Wavelength (Å) 0.97942 0.97942
Space group C2 C2
Cell parameters a = 160.1, b = 100.3, c = 79.6 α = 90.0, β = 113.3, γ = 90.0 a = 163.7, b = 101.0, c = 82.4 α = 90.0, β = 114.5, γ = 90.0
Resolution (Å) 20.0 − 1.65 (1.68 − 1.65) 19.80 − 2.50 (2.54 − 2.50)
Completeness (%) 95.2 (94.1) 98.2 (99.3)
Rmergea (%) 6.7 (81.4) 7.6 (16.5)
Reflections, Total/Unique 848,481/131,592 (6498) 190,169/41,273 (2,073)
Multiplicity 6.5 (5.7) 4.6 (4.8)
Temperature (K) 100 100
I/Sigmab (I) 17.6 (1.4) 18.8 (6.3)
FOMc, Resolve (20–2.5 Å) 0.39
Rfactord/Rfreee 0.16/0.19
No. of atoms, protein/water 1,145/808
Clashscoref, all atoms 2.01
Ramachandran plot
Favored region (%) 98.1
Allowed region (%) 1.9
Outliers (%) 0
Poor rotamers (%) 0
Average B factors (Å2)
Protein 22.7
Solvent 35.6
rmsds
Bonds (Å) 0.007
Angles (o) 1.24

Values in parentheses are for the highest-resolution shell. FOM, figure of merit; rmsds, root-mean-square-deviations from ideal values (Engh and Huber, 1991). aRmerge = åhkli (| Ihkl,i-<Ihkl>|)]/åhkl,i<Ihkl>, where Ihkl,i is the intensity of an individual measurement of the reflection with Miller indices hkl and <Ihkl> is the mean intensity of that reflection. bI/Sigma means <I>/σ. cFigure of merit = ∣ P(α)eiα/P(α)∣, where P(α) is the phase probability distribution and α is the phase (100.0-2.75 Å). dRfactor = Σhkl∣∣Fobs∣-∣Fcalc∣∣/ΣhklFobs∣; where Fobs and Fcalc are the observed and calculated structure factor amplitudes, respectively, for the reflections hkl included in the refinement. eRfree is the same as Rfactor but calculated over a randomly selected fraction (10%) of the reflection data not included in the refinement. f Clashscore is the number of serious steric overlaps (>0.4 Å) per 1,000 atoms. The 100th percentile is the best among the structures of comparable resolution, whereas the 0th percentile is the worst.