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. Author manuscript; available in PMC: 2020 Dec 11.
Published in final edited form as: Cell Host Microbe. 2019 Nov 26;26(6):795–809.e5. doi: 10.1016/j.chom.2019.10.007

Key Resources Table

Reagent Source Identifier
Antibodies
Per-Cp-Cy5.5 anti-mouse TCR-beta (clone H57-597) Biolegend Cat# 109228; RRID: AB_1575173
Per-Cp-Cy5.5 anti-mouse Ly6G (clone 1A8) Biolegend Cat# 127616; RRID: AB_1877271
Per-Cp-Cy5.5 anti-mouse CD24 (clone M1/69) Biolegend Cat# 101823; RRID: AB_1595596
FITC anti-mouse/Rat ICOS (clone C398.4A) Thermo Fisher Scientific Cat# 11-9949-82; RRID: AB_465458
FITC anti-mouse CD3 (clone 17A2) BD Biosciences Cat# 555274; RRID: AB_395698
FITC anti-mouse GL3 (clone eBioGL3) Thermo Fisher Scientific Cat# 11-5711-82; RRID: AB_465238
Pe-Cy7 anti-mouse CD8 (clone 53-6.7) BD Biosciences Cat# 552877; RRID: AB_394506
Pe-Cy7 anti-mouse CD11c (clone HL3) BD Biosciences Cat# 558079; RRID: AB_647251
Pe-Cy7 anti – mouse pro-IL-1 beta (NJTEN3) Thermo Fisher Scientific Cat# 25-7114-82; RRID: AB_2573526
PE anti-mouse CD4 (clone GK1.5) Biolegend Cat# 100407; RRID: AB_312692
PE anti-mouse CD207 (clone eBioL31) Thermo Fisher Scientific Cat# 12-2075-82; RRID: AB_763452
APC-efluor 780 anti-mouse B220 (clone RA3-6B2) Thermo Fisher Scientific Cat# 47-0452-80; RRID: AB_1518811
APC-efluor 780 anti-mouse CD3 (clone 145-2C11) Thermo Fisher Scientific Cat# 47-0031-82; RRID: AB_11149861
APC-efluor 780 anti-mouse CD11b (clone M1/70) Thermo Fisher Scientific Cat# 47-0112-82; RRID: AB_1603193
APC-efluor 780 anti-mouse CD11c (clone N4818) Thermo Fisher Scientific Cat# 47-0114-82; RRID: AB_1548652
APC-efluor 780 anti-mouse F4/80 (clone BM8) Invitrogen Cat# 47-4801-82; RRID: AB_2735036
AlexaFluor700 anti-mouse CD45 (clone 30-F11) Invitrogen Cat# 56-0451-82; RRID:AB_891454
APC anti-mouse CD44 (clone IM7) Thermo Fisher Scientific Cat# 17-0441-82; RRID: AB_469390
APC anti-mouse MHCII (clone M5/114.15.2) Thermo Fisher Scientific Cat# 17-5321-82; RRID: AB_469455
APC anti-mouse CD4 (clone GK1.5) Thermo Fisher Scientific Cat# 47-0041-82; RRID:AB_11218896
APC anti-mouse CD103 (clone 2E7) Thermo Fisher Scientific Cat# 17-1031-82; RRID: AB_1106992
e450 anti-mouse MHCII (clone M5/114.15.2) Thermo Fisher Scientific Cat#48-5321-82; RRID: AB_1272204
e450 anti-mouse Foxp3 (clone FJK-16S) Thermo Fisher Scientific Cat#48-5773-82; RRID: AB_1518812
BV480 anti-mouse CD44 (clone IM7) BD Biosciences Cat# 566116; RRID:AB_655116
BV605 anti-mouse Ly6C (clone HK1.4) Biolegend Cat#128035; RRID: RRID:AB_2562352
BV605 anti-mouse CD8 (clone 53-6.7) Biolegend Cat# 100744; RRID: AB_2562609
BV605 anti-mouse TCR-beta (clone H57-597) BD Biosciences Cat# 562840; RRID: AB_2687544
BV650 anti-mouse CD11c (clone N418) Biolegend Cat# 117339; RRID:AB_2562414
BV650 anti-mouse CD4 (clone RM4-5) BD Biosciences Cat#563747; RRID: AB_2716859
BV711 anti-mouse CD11b (clone M1/70) Biolegend Cat#101241; RRID:AB_11218791
BV711 anti-mouse CD3 (clone 145-2C11) BD Biosciences Cat#563123; RRID: AB_2687954
BV786 anti-mouse CD64 (clone X54-5/7.1) BD Biosciences Cat#741024; RRID:AB_2740644
 
Chemicals, Peptides, and Recombinant Proteins
Collagenase from Clostridiumhistolyticum, Type XI Sigma-Aldrich Cat#C9407
Collagenase from Clostridiumhistolyticum, Type I Sigma-Aldrich Cat#SCR103
Collagenase from Clostridiumhistolyticum, Type IV Sigma-Aldrich Cat#lS00418
DNase Sigma-Aldrich Cat#DN25
Hyaluronidase from bovine testes Sigma-Aldrich Cat#H3506
α-hemolysin from Staphylococcus aureus Sigma-Aldrich Cat#H9395
Tryptic Soy Medium BD-Bacto Cat#211825
Brain Heart Infusion Medium BD-Bacto Cat#221570
Recombinant Murine IL-1β Peprotech Cat#211-11B
 
Recombinant Murine IL-1α Peprotech Cat#211-11A
PE-conjugated 2w-loaded I-A(b) Tetramer Provided by James Moon N/A
Fetal bovine serum Fisher scientific Cat#SH3054103
Fetal calf serum Fisher scientific Cat#SH3007303
mGM-CSF PeproTech Cat#315-03
 
Critical Commercial Assays
Pierce LDH cytotoxicity assay kit Thermo Scientific Cat#88953
IL1β ELISA kit R&D systems Cat#DY401-05
RNeasy Fibrous Tissue Mini Kit Qiagen Cat#74704
gentleMACS M Tubes Miltenyi Biotec Cat#130-093-236
RNAlater Stabilization Solution Life Technologies Cat#AM7020
EasySep™ Mouse PE Positive Selection Kit StemCell Technologies Cat# 18554
Mouse FoxP3 Buffer Set eBiosciences Cat# 00-5523-00
Ghost Dye™ Violet 510 Live/Dead Stain Tonbo Biosciences Cat# 13-0870-T100
Ghost Dye Violet 780 Live/Dead Stain Tonbo Cat# 13-0865-T100
 
Experimental Models: Organisms/Strains
SPF B6 mice Jackson Laboratory C57BL/6J Cat#000664
Ccr7−/− Jackson Laboratory B6.129P2(C)-Ccr7tm1Rfor/J Cat#006621
Il1r1−/− Jackson Laboratory B6.129S7-Il1r1tm1Imx/J Cat#003245
 
Experimental Models: Organisms/Strains
Staphylococcus epidermidis Tü3298 Provided by Michael Otto (Augustin and Gotz, 1990) N/A
Staphylococcus aureus SF8300 parent strain Provided by Binh Diep (Diep et al., 2008b) N/A
Staphylococcus aureus SF8300 lacking ermB-encoding plasmid Provided by Binh Diep N/A
Staphylococcus aureus SF8300 Δhla Provided by Binh Diep (Diep et al., 2016) N/A
Staphylococcus aureus SF8300 Δpsm Generated for these studies N/A
Staphylococcus aureus USA300 NRS384 NARSA N/A
Staphylococcus aureus AD04.E17 Provided by Heidi Kong & Julia Segre N/A
Staphylococcus epidermidis NIHLM015- 2D12 Provided by Heidi Kong & Julia Segre N/A
Staphylococcus epidermidis NIHLM037- 5A02 Provided by Heidi Kong & Julia Segre N/A
Staphylococcus aureus Mu50φ Provided by Paul Sullam N/A
Staphylococcus epidermidis BCM060 BEI N/A
Staphylococcus epidermidis W23144 BEI Cat#HM-142
Staphylococcus epidermidis SK135 BEI Cat#HM-118
Staphylococcus hominis SK119 BEI Cat#HM-119
Corynebacterium accolens ATCC 49725 ATCC N/A
Corynebacterium propinquum DSM44285 Provider by Katherine Lemon N/A