Table 1. m6A modulator families.
Family | Abbreviation | Name | Function | Forward primer | Reverse primer |
---|---|---|---|---|---|
The “writers” of m6A modification | METTL3 | Methyltransferase-like 3 | METTL14, METTL3 form m6A methyltransferase complex. WTAP guided and localized the METTL3–METTL14 complex into nuclear speckles to efficiently methylate target RNAs | TTGTCTCCAACCTTCCGTAGT | CCAGATCAGAGAGGTGGTGTAG |
METTL14 | Methyltransferase-like 14 | GAACACAGAGCTTAAATCCCCA | TGTCAGCTAAACCTACATCCCTG | ||
The “readers” of m6A modification | YTHDF1 | YT521-B homology F1 | YTHDF proteins directly bind and recognize m6A methylation on mRNAs, spatiotemporal control over RNA metabolism in a collaborative way; YTHDF1 can stimulate the translation of target mRNA, while YTHDF2 promotes mRNA decay; YTHDF3 regulates RNA metabolism | ACCTGTCCAGCTATTACCCG | TGGTGAGGTATGGAATCGGAG |
YTHDF2 | YT521-B homology F2 | AGCCCCACTTCCTACCAGATG | TGAGAACTGTTATTTCCCCATGC | ||
YTHDF3 | YT521B homology F3 | GCTATCCACCTAGTTCTCTTGGG | ATGCCAGGCACCTTACTCAAA | ||
The “erasers” of m6A modification | FTO | Fat mass and obesity-associated protein | FTO is the first enzyme identified to demethylate RNA m3U and m6A | AACACCAGGCTCTTTACGGTC | TGTCCGTTGTAGGATGAACCC |
ALKBH5 | AlkB homolog 5 | ALKBH5 might serve as another demethylase and regulate m6A in mRNAs | CGGCGAAGGCTACACTTACG | CCACCAGCTTTTGGATCACCA |
m6A, N6-methyladenosine; mRNA, messenger RNA; m3U, 3-methyluridine.