Table 1.
Coverage statistics for Listeria monocytogenes from h 20 to h 40 of enrichments
| Hour | Rep | Number of Reads | Reads Mapped to L. mono | Average Coverage |
|---|---|---|---|---|
| 20 | 1 | 2.2E+ 06 | 1.66% | 1.57X |
| 20 | 2 | 2.6E+ 06 | 1.44% | 1.62X |
| 20 | 3 | 2.3E+ 06 | 1.27% | 1.28X |
| 20 | 4 | 2.7E+ 06 | 1.98% | 2.23X |
| Avg | 2.4E+ 06 | 1.60% | 1.68X | |
| 24 | 1 | 1.7E+ 06 | 11.82% | 9.08X |
| 24 | 2 | 1.7E+ 06 | 15.12% | 12.03X |
| 24 | 3 | 2.1E+ 06 | 18.07% | 15.50X |
| 24 | 4 | 2.3E+ 06 | 15.32% | 14.34X |
| Avg | 2.0E+ 06 | 15.10% | 12.74X | |
| 28 | 1 | 1.9E+ 06 | 51.80% | 41.27X |
| 28 | 2 | 1.5E+ 06 | 54.90% | 33.99X |
| 28 | 3 | 1.1E+ 06 | 51.74% | 25.40X |
| 28 | 4 | 1.0E+ 06 | 56.93% | 26.83X |
| Avg | 1.4E+ 06 | 53.84% | 31.87X | |
| 32 | 1 | 1.4E+ 06 | 87.44% | 49.47X |
| 32 | 2 | 9.1E+ 05 | 88.99% | 34.97X |
| 32 | 3 | 1.6E+ 06 | 78.56% | 52.97X |
| 32 | 4 | 1.4E+ 06 | 88.78% | 54.78X |
| Avg | 1.3E+ 06 | 85.90% | 48.05X | |
| 36 | 1 | 8.8E+ 05 | 96.14% | 58.54X |
| 36 | 2 | 6.2E+ 05 | 84.28% | 37.91X |
| 36 | 3 | 1.1E+ 05 | 89.32% | 4.45X |
| 36 | 4 | 1.1E+ 06 | 96.01% | 63.27X |
| Avg | 6.7E+ 05 | 91.40% | 41.04X | |
| 40 | 1 | 9.0E+ 05 | 97.78% | 51.25X |
| 40 | 2 | 4.1E+ 05 | 89.68% | 26.50X |
| 40 | 3 | 1.0E+ 06 | 76.92% | 51.79X |
| 40 | 4 | 1.4E+ 06 | 96.94% | 81.45X |
| Avg | 9.4E+ 05 | 90.30% | 52.75X |
Hour, replication number, number of total reads, percentage of reads mapped to Lm, and Lm genome coverage statistics are shown for each of four independent replicates of ice cream enrichments from h 20 to h 40 of recovery enrichments