Table 2.
PhyloNet results and AIC calculations to select optimal network, with the optimal network in bold.
# Reticulations | lnL | ΔlnL | # Branch lengths | k | AIC | ΔAIC |
---|---|---|---|---|---|---|
0 | −3997622 | 7 | 7 | 7995257.07 | 8583.05408 | |
1 | −3995167 | 2454.80068 | 7 | 8 | 7990349.47 | 3675.45272 |
2 | −3994063 | 1104.14995 | 7 | 9 | 7988143.17 | 1469.15281 |
3 | −3993325 | 737.576407 | 9 | 12 | 7986674.02 | 0 |
4 | −3993355 | −29.658988 | 7 | 11 | 7986731.33 | 57.3179761 |
5 | −3993584 | −229.53622 | 9 | 14 | 7987196.41 | 522.390411 |
L is the likelihood value, and k is number of reticulations plus branch lengths (number of parameters used in the AIC calculation).