Table 2.
Genome assembly of S. schlegelii
| Description | First assembly | Second assembly | Third assembly | Fourth error correction |
|---|---|---|---|---|
| Platform | PacBio | 10× Genomics | Hi-C | Illumina reads |
| Software | Falcon | FragScaff | Lachesis | Pilon |
| No. of contig | 2,031 | 2,031 | 2,031 | 2,019 |
| Total length of contig (Mb) | 842.15 | 843.91 | 843.91 | 843.86 |
| Contig N50 (Mb) | 2.92 | 2.93 | 2.93 | 2.96 |
| Minimum length (bp) | 129 | 129 | 129 | 130 |
| Maximum length (Mp) | 10.97 | 10.99 | 10.99 | 10.99 |
| No. of Scaffold | 2,031 | 1,471 | 854 | 854 |
| Total length of Scaffold (Mb) | 842.15 | 847.88 | 847.94 | 848.31 |
| Scaffold N50 (Mp) | 2.92 | 4.34 | 35.60 | 35.63 |
| Minimum length (bp) | 129 | 129 | 129 | 130 |
| Maximum length (Mp) | 10.97 | 15.60 | 43.18 | 43.20 |
| N (%) | 0 | 0.47 | 0.48 | 0.52 |