Table 3.
Statistics for genome characteristic of S. schlegelii
| Genome characteristic | |
|---|---|
| Estimated genome size (Mb) | 842.97 |
| Assembled genome size (Mb) | 848.31 |
| Reads mapping rate (%) | 97.93 |
| Genome coverage (%) | 99.61 |
| GC content (%) | 40.75 |
| Homology SNP (%) | 0.00038 |
| CEGMA evaluate (%) | 92.34 |
| BUSCO genome completence | n=2586 |
| Complete | 2470 (95.5%) |
| Complete and single copy | 2400 (92.8%) |
| Complete and duplicated | 70 (2.7%) |
| Fragmented | 54(2.1%) |
| Missing | 62 (2.4%) |
The percentage of homology SNP reflects the accuracy of genome assemble, and the results Homology SNP 0.00038% shows that the level of the genome assembly possesses high quality at single base level.