Table 2:
Constructs | Ligands (PDB/ EMDB ID; resolution) | Structure highlights | Reference |
---|---|---|---|
hamster SUR1 (Q608K)+mouse Kir6.2 | Glibenclamide (5WUA/EMD-6689; 5.6Å) | Kir6.2 closed and SUR1 inward-facing Glibenclamide and PIP2 density tentatively assigned; however, glibenclamide density assignment was later corrected in Wu et al. |
[65] |
hamsterSUR1+ratKir6.2 | Glibenclamide+ATP (5TWV/5.8Å) | Resolved ATP cryoEM density in Kir6.2 | [67] |
hamsterSUR1+ratKir6.2 | Glibenclamide+ATP (6BAA/EMD-7073; 3.7Å) | Resolved glibenclamide cryoEM density in SUR1 | [66] |
humanSUR1-(6aa linker)-humanKir6.2 fusion1 | MgATP+PIP2 Class 1: quatrefoil (6C3O/EMD-7339; 3.9Å) Class 2: propeller (6C3P/EMD-7338; 5.6Å) | SUR1’s NBDs dimerized, with MgATP bound at NBD1 and MgADP at NBD2; Kir6.2 closed, bound to ATP Two conformations were resolved: quatrefoil and propeller, with the quatrefoil form being the dominant class |
[64] |
hamsterSUR1-(39aa linker)-mouseKir6.2 fusion1 | ATPγS (5YW8/EM D-6848; 4.4Å) Glibenclamide/ATPγS (5YKE/EMD-6831; 4.1Å) MgADP/NN414/PIP2 (5YWC/EMD-6852; 4.3Å) |
Glibenclamide density assigned Only propeller-like conformation was observed in MgADP bound, NBDs-dimerized structure Tentative assignment of NN414 density |
[68] |
hamsterSUR1-(39aa linker)-mouseKir6.2 fusion | Repaglinide+ATPγS (6JB1/EMD-9787; 3.3Å) | Repaglinide density assigned | [63] |
hamsterSUR1+ratKir6.2 | SUR1 bound to: Glibenclamide+ATP | SUR1 NBD1 bound to ATP in all structures except the apo state structure | [52] |
(6PZA/EM D-20530; 3.7Å) Repaglinide+ATP (6PZ9/EMD-20528; 3.7Å) Carbamazepine+ATP (6PZC/EMD-20530; 4.3Å) ATP only (6PZI/EMD-20535; 4.5Å) Apo (6PZB/EMD-20533; 4.6Å) |
Glibenclamide, repaglinide, and carbamazepine cryoEM density found in the same binding pocket, and no density observed in the pocket in ATP only or apo state structures Kir6.2 N-term density assigned in the drug-bound structures |
Only the dominant class or the best resolution structure for each liganded state is included.