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. 2020 Jan 31;21:114. doi: 10.1186/s12864-020-6532-1

Table 1.

Sequencing and assembly results of three chloroplast genomes of Taxodium

Species Raw data (Mb) Clean data (Mb) Clean data GC(%) Clean data Q20(%) Clean data Q30(%) GC Content(%) N rate (%)
T. ascendens 5329 4895 37.85 98.02 93.94 35.22% 0%
T. distichum 5045 4695 35.74 98.11 94.2 35.26% 0%
T. mucronatum 6946 6595 34.19 98.38 94.91 35.25% 0%

Note: Read length: read length of valid data; Clean data GC: average GC content of valid data; Clean data Q20: Q20 value of valid data; Clean data Q30: Q30 value of valid data. Total Length (bp): The total length of the sample assembly result; GC Content (%): GC content of the sample assembly sequence; N rate (%): the content of unknown base N in the sample assembly sequence