Table 1.
The performance comparison of BCREval and Bismark
| ENCODE ID | File Size | Reads Number | Processing Time | Memory Usage | CHH methylation ratio % | |||
|---|---|---|---|---|---|---|---|---|
| Bismark | BCREval | Bismark | BCREval | Bismark | BCREval | |||
| ENCFF055UXZ | 1.1G | 12 M | 4 h 49 m | 10 m | 10G | 44 M | 0.7 | 0.56 |
| ENCFF336KJH | 687 M | 12 M | 4 h 8 m | 9 m | 10G | 44 M | 0.5 | 0.54 |
| ENCFF677BSB | 926 M | 12 M | 5 h 28 m | 9 m | 10G | 44 M | 1.1 | 0.42 |
| ENCFF781BRM | 833 M | 12 M | 5 h 5 m | 9 m | 10G | 44 M | 0.5 | 0.26 |
| ENCFF710XQC | 1011 M | 12 M | 5 h 5 m | 10 m | 10G | 44 M | 0.8 | 0.45 |
| ENCFF211RZY | 1.1G | 12 M | 4 h 39 m | 10 m | 10G | 44 M | 0.5 | 0.17 |
| ENCFF563QAT | 821 M | 12 M | 4 h 31 m | 8 m | 10G | 44 M | 0.5 | 0.18 |
| ENCFF311PSV | 686 M | 12 M | 4 h 36 m | 10 m | 10G | 44 M | 1.1 | 0.3 |