Table 6.

Representation of Characterization Rubrics in Stem Cell Databases (Plus Sign Indicates Presence in a Database)

MIACARM Module	Rubric	SyStemCell	CODEX	ESTOOLS	SCDE	StemFormatics	LINCS	LifeMap Discovery	StemMapper	ESCAPE	SKiP	hPSCreg	CellNet	StemCellNet	HSC-explorer	CORTECON	ESCD
1. Project	1. Summary	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+
	2. Organization	+	+	+	+	+	+		+		+	+			+	+	+
	3. PI/Corresponding researcher			+	+	+			+				+	+
4. Publication	+	+	+	+	+	+	+	+	+			+	+	+	+	+
2. Assay	5. Clinical Trials for Cell Therapies							+
3. Source Cell	6. Stem Cell Type/Name	+	+	+	+	+		+	+	+	+	+	+	+		+	+
	7. Stem Cell Subtype		+			+		+	+
	8. Stem Cell Lineage	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+
	9. Stem Cell Species	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+
	10. Sex of the Donor			+							+	+
	11. Age of Donor					+			+		+
	12. Ethnicity of the Donor										+
	13. Disease State of Donor			+	+	+	+				+	+			+	+
	14. Developmental Stage				+
	15. Cell Derivation Process											+
	16. Differentiation Status			+								+			+
	17. Cell Morphology										+
	18. Phenotype Quality				+
	19. Tissue Type		+	+	+	+	+	+			+
	20. Tissue Histology				+
	21. Cell Surface Markers	+			+				+	+		+		+	+	+	+
	22. Transcription Factors Expression	+	+		+								+	+			+
	23. Epigenetic Modification	+	+		+					+
	24. Gene Annotation	+								+
	25. miRNA-based Regulation/Interactions	+								+
	26. Protein Phosphorylation	+
	27. Karyotype			+							+	+
	28. Mutation Status of a Donor		+				+		+
29. Cell Culture Conditions		+	+	+		+	+			+	+
4. Experimental Technology	30. Immunoprecipitation Antibody				+									+			+
	31. Gene Expression Data					+		+							+	+	+
	32. Microarray Data		+	+	+				+				+	+
33. miRNA Expression/Transcription	+	+		+					+					+
5. Data	34. Sequencing Platform	+	+	+	+	+	+	+	+	+				+	+		+
35. Data analysis tools	+	+	+	+	+		+	+	+			+	+	+	+	+