Table 2.
In silico analysis of novel variants
| Amino acid change | Conservation | |||||
|---|---|---|---|---|---|---|
| SIFT | Mutation Taster | PolyPhen-2 | GERP | PhastCon | PhyloP | |
| c.215A > G p.(Asp72Gly) | Deleterious 0.03 | Disease causing 1.00 | Possibly damaging 0.948 | Conserved 5.65 | Conserved 0.999 | Conserved 4.839 |
| c.362T > C p.Ile121Thr | Deleterious 0 | Disease causing 1.00 | Probably damaging 0.979 | Conserved 6.04 | Conserved 1 | Conserved 5.252 |
| c.440A > C p.Asn147Thr | Deleterious 0 | Disease causing 1.00 | Probably damaging 1.00 | Conserved 6.040 | Conserved 1 | Conserved 5.253 |
| c.697G > A p.Val233Ile | Deleterious 0 | Disease causing 1.00 | Probably damaging 0.999 | Conserved 5.74 | Conserved 1 | Conserved 6.212 |
Prediction of pathogenicity of novel variants in RDH12.
(SIFT) Sorting Intolerant from Tolerant, (PolyPhen-2) Polymorphism Phenotyping version 2, (GERP) genomic evolutionary rate profiling.