Table 1. Percent of SNPs displaying ASE in 233 TCGA patients.

	Pattern	% Total SNPs	% All COSMIC	% TSG	% Oncogene	% Fusion
BRCA	1	7.3	7.6	7.3	7.0	8.3
	2	0.4	0.8	0.3	0.4	1.4
	3	0.1	0.2	0.0	0.0	0.3
	4	3.8	4.1	3.7	3.4	4.8
	5	2.6	2.5	2.8	2.2	2.7
	6	0.5	0.5	0.8	0.4	0.4
	No ASE	85.2	84.4	85.1	86.6	82.1
HNSC	1	8.7	9.7	10.5	10.1	8.3
	2	0.4	0.4	0.0	0.0	0.9
	3	0.2	0.3	0.0	0.0	0.6
	4	4.6	4.5	3.7	4.2	4.7
	5	2.1	1.7	1.3	1.2	2.0
	6	0.7	1.0	0.5	0.9	1.0
	No ASE	83.4	82.5	83.9	83.5	82.4
LUAD	1	9.7	10.7	9.2	9.8	12.0
	2	0.3	1.0	0.1	0.0	2.0
	3	0.2	1.0	0.0	0.0	1.9
	4	5.4	6.8	7.0	6.5	6.9
	5	1.9	2.3	2.2	1.6	2.7
	6	0.7	0.8	1.1	0.6	0.9
	No ASE	81.7	77.4	80.4	81.5	73.5
THCA	1	2.1	2.3	2.3	1.7	2.6
	2	0.2	0.5	0.0	0.1	1.0
	3	0.0	0.0	0.0	0.0	0.0
	4	0.5	0.8	0.5	0.4	1.1
	5	1.6	1.9	1.3	2.0	2.1
	6	0.1	0.0	0.0	0.0	0.0
	No ASE	95.5	94.5	95.9	95.8	93.2