TABLE 1.
Study | Visit | PTID | DH | Parameters for: |
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---|---|---|---|---|---|---|---|---|---|---|---|---|
Heavy chains |
Light chains |
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Variable segment | Joining segment | CDR3 length (aa) | % mut (nt) | Ig isotype/subclass | Variable segment | Joining segment | CDR3 length (aa) | % mut (nt) | ||||
RV144 | 8 | RV144_140 | DH677.1 | 1∼8 | 1 | 16 | 1.04 | IgG1 | κ1∼27 | 5 | 9 | 0.857 |
RV305 | 5 | RV305_094 | DH677.3 | 1∼8 | 1 | 16 | 3.47 | IgG1 | κ1∼27 | 5 | 9 | 2.87 |
RV305 | 5 | RV305_082 | DH697 | 1∼46 | 6 | 24 | 7.99 | IgG1 | λ1∼44 | 3 | 11 | 4.87 |
RV305 | 5 | RV305_094 | DH677.2 | 1∼8 | 1 | 16 | 2.43 | IgG1 | κ1∼27 | 5 | 9 | 2.86 |
RV305 | 5 | RV305_082 | DH838 | 3∼23 | 4 | 12 | 4.17 | IgG1 | Λ8∼61 | 3 | 10 | 2.22 |
RV305 | 5 | RV305_094 | DH677.4 | 1∼8 | 1 | 16 | 4.51 | IgG1 | κ1∼27 | 5 | 9 | 2.57 |
RV305 | 5 | RV305_082 | DH695 | 1∼2 | 6 | 22 | 5.56 | IgG1 | κ1∼39 | 3 | 9 | 5.30 |
RV305 | 5 | RV305_082 | DH694 | 1∼46 | 6 | 22 | 10.42 | IgG1 | κ1∼39 | 5 | 9 | 8.71 |
RV305 | 5 | RV305_094 | DH688.1 | 1∼46 | 6 | 23 | 6.97 | IgG3 | κ1∼39 | 4 | 9 | 6.00 |
RV305 | 5 | RV305_094 | DH705.5 | 1∼46 | 6 | 23 | 5.77 | IgG3 | κ3∼20 | 2 | 10 | 4.49 |
RV305 | 5 | RV305_094 | DH705.4 | 1∼46 | 6 | 23 | 6.01 | IgG1 | κ1∼39 | 5 | 9 | 3.43 |
RV305 | 5 | RV305_3119 | DH886 | 1∼2 | 4 | 12 | 8.38 | IgG3 | κ1∼39 | 4 | 9 | 4.92 |
RV305 | 5 | RV305_031 | DH690 | 1∼46 | 6 | 24 | 6.92 | IgG1 | λ1∼44 | 2 | 11 | 3.62 |
RV305 | 5 | RV305_094 | DH692 | 1∼46 | 6 | 25 | 1.66 | IgG1 | κ1∼39 | 4 | 9 | 2.57 |
RV305 | 5 | RV305_094 | DH693 | 1∼46 | 4 | 26 | 5.18 | IgG1 | κ1∼9 | 5 | 9 | 2.86 |
RV305 | 5 | RV305_094 | DH836 | 1∼46 | 6 | 16 | 5.32 | IgG1 | κ1∼12 | 4 | 9 | 2.86 |
RV305 | 5 | RV305_094 | DH688.2 | 1∼46 | 6 | 23 | 7.69 | IgG3 | κ1∼39 | 4 | 9 | 6.57 |
RV305 | 5 | RV305_031 | DH689.1 | 1∼46 | 6 | 22 | 10.17 | IgG3 | κ1∼39 | 2 | 9 | 9.71 |
RV305 | 5 | RV305_031 | DH689.2 | 1∼46 | 6 | 22 | 10.41 | IgG3 | κ1∼39 | 1 | 8 | 8.55 |
RV305 | 5 | RV305_031 | DH687.2 | 1∼46 | 4 | 23 | 5.77 | IgG1 | κ3∼20 | 3 | 10 | 1.97 |
PBMCs used for MAb isolation were collected 2 weeks after the final boost in RV144 or 2 weeks after the second boost in RV305. All four RV305 vaccinees studied were from group II, boosted 2× with AIDSVAX B/E. RT-PCR-amplified variable heavy- and light-chain genes were Sanger sequenced (Genewiz) and analyzed with Cloanalyst (13). PTID, patient identifier; DH, antibody identifier.