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. 2020 Feb 3;21:117. doi: 10.1186/s12864-020-6492-5

Table 1.

Statistic analysis of clean reads for mRNA in tuber initiation and expansion stages in yam

Sample Total_1 GH16_I_r1 GH16_I_r2 GH16_I_r3 GH16_E_r1 GH16_E_r2 GH16_E_r3 Sum
Total Raw Reads (Mb) 74.71 66.43 66.42 66.52 66.43 66.43 66.35
Total Clean Bases (Gb) 6.67 6.57 6.57 6.58 6.56 6.57 6.56
Clean Reads Q20(%) 96.4 98.63 98.56 98.54 98.52 98.5 98.57
Clean Reads Q30(%) 88.22 93.12 92.86 92.78 92.67 92.63 92.95
Clean Reads Ratio(%) 89.34 98.91 98.92 98.96 98.7 98.87 98.9
Total Mapped Reads(%) 83.07 83.34 83.17 82.05 81.77 82.03
Total Expressed Genes 29,658 29,905 29,839 30,012 29,893 29,811 32,026
Total trinity Transcripts 54,781
Total Tgicl Genes 32,207
GeneGC(%) 44.63
GeneN50 1508