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. 2020 Feb 4;10:1756. doi: 10.1038/s41598-020-58623-1

Table 3.

Overview of Streptomyces sp. VN1 genome analysis by antiSMASH of 17 secondary metabolites of biosynthetic gene clusters and seven PKS and NRPS gene clusters sharing similarity of more than 40%.

No Cluster Type From To Most similar known biosynthetic gene cluster (percent of similarity) Reference strain Accession number
1 1 Oligosaccharide-T1PKS-T3PKS-NRPS 10491 225803 Lobophorin A (96%) Streptomyces sp. FXJ7.023 JX306680
2 2 Terpene 237497 258555 2-Methylisoborneol (100%) Streptomyces griseus AP009493
3 5 Terpene 539486 563714 Carotenoid (54%) Streptomyces avermitilis AB070934
4 9 Ectoine 1684875 1695273 Ectoine (100%) Streptomyces anulatus AY524544
5 10 Melanin 2650272 2660898 Melanin (100%) Streptomyces coelicolor A3(2) AL645882
6 11 Lassopeptide 2720839 2743360 SSV-2083 (50%) Streptomyces sviceus NZ_CM000951
7 12 Siderophore 2756614 2768407 Desferrioxamine_B (83%) Streptomyces coelicolor A3(2) AL645882
8 15 Lantipeptide 4240796 4272172 SBI-06990 alpha/SBI-06989 beta (50%) Streptomyces bingchenggensis CP002047
9 17 Terpene 5321623 5342708 Albaflavenone B (100%) Streptomyces coelicolor A3(2) AL645882
10 18 T2PKS 5408372 5450926 Spore_pigment (66%) Streptomyces avermitilis AB070937
11 20 T1PKS-NRPS 6048796 6212376 Friulimicin (75%) Actinoplanes friuliensis AJ488769
12 21 T1PKS-NRPS 6260144 6309491 Xiamycin (77%) Streptomyces sp. SCSIO 02999 JQ812811
13 26 T2PKS 6650019 6692435 Enterocin (95%) Streptomyces maritimus AF254925
14 28 Terpene-NRPS 7137719 7221298 Hopene (92%) Streptomyces coelicolor A3(2) AL645882
15 29 T1PKS 7275849 7358369 Divergolide (100%) Streptomyces sp. HKI0576 HF563079
16 30 Bacteriocin 7687326 7697541 Informatipeptin (42%) Streptomyces viridochromogenes DSM 40736 GG657757
17 32 NRPS 7898917 7949836 Coelichelin (100%) Streptomyces coelicolor A3(2) AL645882

The number of BGCs is determined with antiSMASH and ClusterFinder OFF.