Table 1.
Primers, probes and their final concentrations in a novel real-time PCR assay (named BdanjoRT1), established to amplify DNA of Besnoitia darlingi, B. jellisoni, B. akodoni, B. neotomofelis and B. oryctofelisi.
| Assay | Names of primers and probes | Sequences of primers and probes 5′–3′ | Modifications of probes | Final concentration | Reference |
|---|---|---|---|---|---|
| BdanjoRT1 | |||||
| BdanjoFor | CAA CCA TTC AAC CTT TGA ACC C | 500 nM | This study | ||
| BdanjoRev | CAC CAT ACT TCC CGA ATG CAC | 500 nM | This study | ||
| Bb11-12 | CCC TCG AAA CGA GAG ATG CAA GC | 5′-FAM, 3′-BHQ1 | 100 nM | Schares et al. (2011) | |
| Internal control PCR, IC2 PCR | |||||
| EGFP1-F | GAC CAC TAC CAG CAG AAC AC | 500 nM | Hoffmann et al. (2006) | ||
| EGFP2-R | GAA CTC CAG CAG GAC CAT G | 500 nM | Hoffmann et al. (2006) | ||
| EGFP1 | AGC ACC CAG TCC GCC CTG AGC A | 5′-HEX, 3′-BHQ1 | 160 nM | Hoffmann et al. (2006) | |