Table A2.
COG categories of the predicted W43T genes
| COG categories | Code | Gene count | Percent (%) |
|---|---|---|---|
| Amino acid transport and metabolism | E | 646 | 13.36 |
| Carbohydrate transport and metabolism | G | 334 | 6.91 |
| Cell cycle control, cell division, chromosome partitioning | D | 44 | 0.91 |
| Cell motility | N | 65 | 1.34 |
| Cell wall/membrane/envelope biogenesis | M | 219 | 4.53 |
| Chromatin structure and dynamics | B | 5 | 0.10 |
| Coenzyme transport and metabolism | H | 213 | 4.40 |
| Cytoskeleton | Z | 1 | 0.02 |
| Defense mechanisms | V | 93 | 1.92 |
| Energy production and conversion | C | 279 | 5.77 |
| Extracellular structures | W | 5 | 0.10 |
| Function unknown | S | 261 | 5.40 |
| General function prediction only | R | 542 | 11.21 |
| Inorganic ion transport and metabolism | P | 306 | 6.33 |
| Intracellular trafficking, secretion, and vesicular transport | U | 58 | 1.20 |
| Lipid transport and metabolism | I | 254 | 5.25 |
| Mobilome: prophages, transposons | X | 52 | 1.08 |
| Nucleotide transport and metabolism | F | 106 | 2.19 |
| Posttranslational modification, protein turnover, chaperones | O | 175 | 3.62 |
| Replication, recombination, and repair | L | 134 | 2.77 |
| Secondary metabolites biosynthesis, transport, and catabolism | Q | 225 | 4.65 |
| Signal transduction mechanisms | T | 193 | 3.99 |
| Transcription | K | 407 | 8.42 |
| Translation, ribosomal structure, and biogenesis | J | 219 | 4.53 |