Table 1.

Selected B. cinerea genes expressed in planta in the hard-green berry (4 wpi), with different functions, with their raw RNA-seq reads.

Gene ID	Function (Blast2GO)	RNA-seq reads (average)					PDB culture
		24 hpi	96 hpi	4 wpi	12 wpi
					Ripe_Peg*	Ripe_ Eg
Bcin01g09570	yt521-b-like splicing	9	8	15	119	2.69	2.18
Bcin02g06140	CP2 transcription factor protein	2	6	12	2	1.77	3.19
Bcin02g06930	1,3-beta-glucan synthase	49	27	20	24	15.89	12.32
Bcin03g01920	Catalase	19	6	32	12	7.58	1.31
Bcin03g07670	NAD-specific glutamate dehydrogenase	30	20	31	10	2.94	11.14
Bcin07g01540	Elongation factor 2	114	68	42	25	21.91	35.27
Bcin07g03980	Chitin- domain 3	22	12	67	7	3.78	2943
Bcin08g05540	ASG1; CND1, similar to Gas1-like protein	129	54	410	35	24.76	35.78
Bcin09g00200	Glucan endo-1,3-beta-glucosidase	15	15	31	8	5.58	8.51
Bcin11g04800	Chitin deacetylase	10	3	67	4	2.39	210
Bcin11g04930	Stress response ish1	7	6	21	19	15.61	348
Bcin12g06170	Allergen; Peptide transport PTR2	8	2	20	1	682	86
Bcin13g05580	Alcohol dehydrogenase 1	100	47	21	4	4.20	37
Bcin13g05810	Aldehyde dehydrogenase	238	46	48	25	10.69	4.57
Bcin14g04260	Cell surface, Gas2	18	4	112	23	21.02	41

*The sequence depth of the samples was double than the rest.

The values at 4 wpi are highlighted with a gray box.