Skip to main content
. 2019 Dec 26;10(2):645–664. doi: 10.1534/g3.119.400910

Table 7. Statistically Significant Obesity PheWAS SNPs.

Phenotype Description SNP Gene β (SE) Odds Ratio PheWAS p-value N Cases Controls
278 Overweight, Obesity rs1620977 NEGR1 0.409 0.070 1.506 4.09x10-9 2819 640 2179
278.1 Obesity rs1620977 NEGR1 0.405 0.071 1.499 1.45x10-8 2779 600 2179
278.11 Morbid Obesity rs1620977 NEGR1 0.432 0.080 1.541 5.96x10-8 2624 445 2179
278.1 Obesity rs1776012 NEGR1 -0.326 0.067 0.722 1.18x10-6 2762 594 2168
278.1 Obesity rs1870676 NEGR1 -0.324 0.067 0.723 1.40x10-6 2757 593 2164
278.1 Obesity rs9424977 NEGR1 -0.321 0.067 0.725 1.46x10-6 2776 599 2177
278 Overweight, Obesity rs1776012 NEGR1 -0.308 0.065 0.735 2.23x10-6 2802 634 2168
278 Overweight, Obesity rs1870676 NEGR1 -0.305 0.065 0.737 2.84x10-6 2797 633 2164
278 Overweight, Obesity rs9424977 NEGR1 -0.303 0.065 0.739 2.87x10-6 2816 639 2177
250.4 Abnormal glucose rs1776012 NEGR1 -0.444 0.095 0.642 3.20x10-6 2664 272 2392
250.4 Abnormal glucose rs1870676 NEGR1 -0.444 0.096 0.642 3.58x10-6 2655 270 2385
250.4 Abnormal glucose rs9424977 NEGR1 -0.424 0.095 0.655 7.81x10-6 2674 273 2401
564 Functional digestive disorders rs750456 CABP5 0.989 0.229 2.689 1.55x10-5 2518 40 2478
278.11 Morbid Obesity rs2241005 KLRB1 -0.321 0.075 0.725 1.64x10-5 2625 445 2180
278.11 Morbid Obesity rs2058426 N/A -0.322 0.075 0.725 1.66x10-5 2621 445 2176
278.1 Obesity rs2568958 N/A -0.294 0.070 0.745 2.89x10-5 2781 601 2180
278.1 Obesity rs2815752 N/A -0.294 0.070 0.745 2.89x10-5 2781 601 2180
564.1 Irritable Bowel Syndrome rs750456 CABP5 0.992 0.238 2.697 2.98x10-5 2515 37 2478
278.11 Morbid Obesity rs1870676 NEGR1 -0.315 0.075 0.730 3.06x10-5 2605 441 2164
278.1 Obesity rs3101336 N/A -0.293 0.070 0.746 3.08x10-5 2781 601 2180
278.11 Morbid Obesity rs1776012 NEGR1 -0.315 0.076 0.730 3.14x10-5 2606 438 2168
250.2 Type 2 Diabetes rs2246606 TDH -0.468 0.115 0.626 4.98x10-5 2591 187 2404
278.1 Obesity rs2953802 N/A 0.266 0.066 1.305 5.13x10-5 2781 601 2180
278.11 Morbid Obesity rs9424977 NEGR1 -0.304 0.075 0.738 5.21x10-5 2620 443 2177
278 Overweight, Obesity rs2568958 N/A -0.274 0.068 0.760 5.88x10-5 2821 641 2180
278 Overweight, Obesity rs2815752 N/A -0.274 0.068 0.760 5.88x10-5 2821 641 2180
278 Overweight, Obesity rs3101336 N/A -0.273 0.068 0.761 6.27x10-5 2821 641 2180
250.2 Type 2 Diabetes rs2736280 TDH -0.452 0.114 0.636 7.48x10-5 2588 187 2401
250 Diabetes Mellitus rs2246606 TDH -0.447 0.114 0.639 8.11x10-5 2596 192 2404
250.2 Type 2 Diabetes rs2953802 N/A 0.431 0.110 1.539 8.90x10-5 2591 187 2404
250.4 Abnormal glucose rs2568958 N/A -0.389 0.100 0.678 1.08x10-4 2678 274 2404
250.4 Abnormal glucose rs2815752 N/A -0.389 0.100 0.678 1.08x10-4 2678 274 2404
278 Overweight, Obesity rs2241005 KLRB1 -0.247 0.064 0.781 1.11x10-4 2821 641 2180
250.4 Abnormal glucose rs3101336 N/A -0.388 0.101 0.678 1.12x10-4 2678 274 2404
278.1 Obesity rs2241005 KLRB1 -0.253 0.066 0.776 1.14x10-4 2781 601 2180
278.1 Obesity rs2058426 N/A -0.250 0.066 0.779 1.43x10-4 2777 601 2176
278 Overweight, Obesity rs2058426 N/A -0.243 0.064 0.784 1.46x10-4 2817 641 2176
250 Diabetes Mellitus rs2736280 TDH -0.426 0.112 0.653 1.48x10-4 2593 192 2401
250.41 Impaired fasting glucose rs1870676 NEGR1 -0.471 0.125 0.625 1.59x10-4 2535 150 2385
278.11 Morbid Obesity rs2953802 N/A 0.278 0.074 1.321 1.76x10-4 2625 445 2180
250 Diabetes Mellitus rs2953802 N/A 0.407 0.109 1.502 1.77x10-4 2596 192 2404
250.41 Impaired fasting glucose rs1776012 NEGR1 -0.464 0.124 0.629 1.80x10-4 2543 151 2392
401.1 Essential Hypertension rs2948300 N/A 0.282 0.078 1.326 3.02x10-4 2737 521 2216
278 Overweight, Obesity rs2953802 N/A 0.231 0.064 1.260 3.06x10-4 2821 641 2180
250.2 Type 2 Diabetes rs2572386 FAM167A -0.415 0.115 0.660 3.15x10-4 2590 187 2403
497 Bronchitis rs1620977 NEGR1 0.673 0.188 1.960 3.47x10-4 2118 60 2058
250.41 Impaired fasting glucose rs9424977 NEGR1 -0.441 0.124 0.644 3.60x10-4 2552 151 2401
278.11 Morbid Obesity rs2568958 N/A -0.283 0.079 0.753 3.66x10-4 2625 445 2180
278.11 Morbid Obesity rs2815752 N/A -0.283 0.079 0.753 3.66x10-4 2625 445 2180
278.11 Morbid Obesity rs3101336 N/A -0.282 0.080 0.754 3.85x10-4 2625 445 2180
HHS Vulnerability Disclosure