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. 2019 Oct 22;101(2):455–472. doi: 10.1111/tpj.14538

Figure 4.

Figure 4

Analysis of the locus of the CYP71AN24 gene in almond varieties and related Prunus species.

(a) Nucleotide conservation of the CYP71AN24 region between Prunus avium, Prunus mume, Prunus persica and Prunus dulcis based on a Mauve multiple alignment (physical distance scale is in bp). White boxes represent inserted regions in P. dulcis. The Integrative Genomics Viewer (IGV) tracks of the gene and transposable element (TE) annotations of P. dulcis and P. persica along with their DNA methylation levels in the three different contexts (CG, CHG and CHH) are shown below.

(b) The IGV spnapshot of the region containing the CYP71AN24 gene and the polymorphic TE insertions displaying the coverages of mapped DNA‐seq reads from re‐sequencing data of sweet‐ and bitter‐kernel P. dulcis varieties, as well as from that of the closely related Prunus webbii.