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. 2020 Feb 6;11:752. doi: 10.1038/s41467-020-14620-6

Fig. 7. PARP screens reveal functionally coherent clusters of genes.

Fig. 7

a Interactions between the top 20 gene hits, ranked by absolute Z-score, from DepMap co-essentiality and STRING network sources. Edges are drawn between genes with an absolute correlation greater than 0.2 or a STRING combined score greater than 0.4. Genes are ordered by absolute average Z-score. b Cluster with Fanconi anemia genes from the DepMap co-essentiality network. Nodes represent genes and the size of each node is proportional to its average Z-score across all screens. Genes with an absolute average Z-score greater than 2 across PARP1 conditions are included in the network. Edges represent Pearson correlations across co-essenitiality profiles in DepMap. Clustering was done by modularity optimization and a single cluster was chosen for visualization. c Cluster with Fanconi anemia genes in the STRING network. Nodes are the same as b. Edges represent combined score in STRING. Edges are drawn between genes with a STRING combined score greater than 0.4. Clustering was done the same as a.